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rifcsplowo2_02_scaffold_2669

Search features with annotation key words

Displaying items 1-30 of 44 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
rifcsplowo2_02_scaffold_2669_1
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

178..579
-----------------
DNA (402bp)
protein (134aa)
Phage protein id=5799533 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_02_scaffold_2669_2
unknown

Not on your lists

551..673
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_3
unknown

Not on your lists

comp(694..912)
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_4
unknown

Not on your lists

984..1361
-----------------
DNA (378bp)
protein (126aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_5
unknown

Not on your lists

comp(1358..1837)
-----------------
DNA (480bp)
protein (160aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_6
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

2020..2520
-----------------
DNA (501bp)
protein (167aa)
dihydrofolate reductase (EC:1.5.1.3)
dihydrofolate reductase n=1 Tax=Treponema bryantii RepID=UPI0003B4E0E5
rifcsplowo2_02_scaffold_2669_7
R_WOR_2_41_12, WOR-2, Bacteria

Not on your lists

2510..3148
-----------------
DNA (639bp)
protein (213aa)
thymidylate kinase (EC:2.7.4.9)
Thymidylate kinase (Fragment) n=1 Tax=Heliobacillus mobilis RepID=Q8GDS3_HELMO
rifcsplowo2_02_scaffold_2669_8
unknown

Not on your lists

3145..3618
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_9
R_OP11_Daviesbacteria_38_18, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

3654..5447
-----------------
DNA (1794bp)
protein (598aa)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI0002E4E753
hypothetical protein
rifcsplowo2_02_scaffold_2669_10
unknown

Not on your lists

comp(5461..5802)
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_11
unknown

Not on your lists

5951..6292
-----------------
DNA (342bp)
protein (114aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_12
unknown

Not on your lists

comp(6289..6504)
-----------------
DNA (216bp)
protein (72aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_13
Plasmodium knowlesi, Plasmodium, Haemosporida, Aconoidasida, Apicomplexa, Eukaryota

Not on your lists

comp(6497..7729)
-----------------
DNA (1233bp)
protein (411aa)
Putative uncharacterized protein n=1 Tax=Plasmodium knowlesi (strain H) RepID=B3LCD5_PLAKH
hypothetical protein
rifcsplowo2_02_scaffold_2669_14
unknown

Not on your lists

7788..8213
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

8276..8803
-----------------
DNA (528bp)
protein (176aa)
hypothetical protein id=5043713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_02_scaffold_2669_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

8800..9222
-----------------
DNA (423bp)
protein (141aa)
coiled-coil id=5043714 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_02_scaffold_2669_trna_2
unknown

Not on your lists

comp(9249..9353)
-----------------
DNA (105bp)
transferRNA
rifcsplowo2_02_scaffold_2669_17

Not on your lists

comp(9383..10159)
-----------------
DNA (777bp)
protein (259aa)
DNA-directed RNA polymerase subunit D n=1 Tax=Methanocella conradii (strain DSM 24694 / JCM 17849 / CGMCC 1.5162 / HZ254) RepID=H8I735_METCZ id=5103687 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase subunit D
rifcsplowo2_02_scaffold_2669_18
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(10159..10437)
-----------------
DNA (279bp)
protein (93aa)
BSCG--ribosomal--protein--S11
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S11
rifcsplowo2_02_scaffold_2669_19
unknown

Not on your lists


comp(10531..11169)
-----------------
DNA (639bp)
protein (213aa)
30S ribosomal protein S4 n=2 Tax=Methanotorris RepID=F6BD43_METIK id=5103689 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S4
rifcsplowo2_02_scaffold_2669_20

Not on your lists


comp(11171..11671)
-----------------
DNA (501bp)
protein (167aa)
BSCG--ribosomal--protein--S13
ASCG--Ribosomal--protein--S13
30S ribosomal protein S13 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS13_NANEQ id=5103690 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S13
rifcsplowo2_02_scaffold_2669_21
unknown

Not on your lists


comp(11714..12301)
-----------------
DNA (588bp)
protein (196aa)
ASCG--Ribosomal--protein--S7
30S ribosomal protein S7 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS7_NANEQ id=5103767 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S7
rifcsplowo2_02_scaffold_2669_22
unknown

Not on your lists

comp(12298..12627)
-----------------
DNA (330bp)
protein (110aa)

This feature has no annotations

rifcsplowo2_02_scaffold_2669_23

Not on your lists


comp(12707..13144)
-----------------
DNA (438bp)
protein (146aa)
30S ribosomal protein S12 n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=RS12_METKA id=5103768 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S12
rifcsplowo2_02_scaffold_2669_24

Not on your lists

comp(13146..13538)
-----------------
DNA (393bp)
protein (131aa)
Putative KH domain protein n=3 Tax=environmental samples RepID=B3T301_9ARCH id=5103769 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_02_scaffold_2669_25

Not on your lists

comp(13540..13788)
-----------------
DNA (249bp)
protein (83aa)
50S ribosomal protein L30e n=12 Tax=Sulfolobus RepID=RL30E_SULSO id=5103775 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L30e
rifcsplowo2_02_scaffold_2669_26
unknown

Not on your lists

comp(13785..16364)
-----------------
DNA (2580bp)
protein (860aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037417CB
DNA-directed RNA polymerase subunit A''
rifcsplowo2_02_scaffold_2669_27
unknown

Not on your lists

comp(16357..18900)
-----------------
DNA (2544bp)
protein (848aa)
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR8_METFV id=5103777 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
rifcsplowo2_02_scaffold_2669_28

Not on your lists

comp(18861..20663)
-----------------
DNA (1803bp)
protein (601aa)
DNA-directed RNA polymerase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYR9_METFV id=5103778 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
rifcsplowo2_02_scaffold_2669_29

Not on your lists

comp(20656..22146)
-----------------
DNA (1491bp)
protein (497aa)
DNA-directed RNA polymerase n=6 Tax=Thermococcus RepID=Q5JE32_PYRKO id=5103779 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA-directed RNA polymerase
Displaying items 1-30 of 44 in total

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