ggKbase home page

rifcsplowo2_02_scaffold_7437

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_7437_1

Not on your lists

comp(2..526)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5048716 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_02_scaffold_7437_2
unknown

Not on your lists

comp(577..882)
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_3
GWA1_OD1_36_12, Parcubacteria, Bacteria

Not on your lists

960..1565
-----------------
DNA (606bp)
protein (202aa)
superoxide dismutase (EC:1.15.1.1)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003615CCB rbh
Superoxide dismutase {ECO:0000313|EMBL:KKP92462.1}; TaxID=1618782 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_36_12.;"
rifcsplowo2_02_scaffold_7437_4
unknown

Not on your lists

1577..1936
-----------------
DNA (360bp)
protein (120aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_5
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(2002..2220)
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003790562
hypothetical protein Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_02_scaffold_7437_6
unknown

Not on your lists

comp(2220..3329)
-----------------
DNA (1110bp)
protein (370aa)
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B2H5_9DELT id=5103222 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Methyltransferase, cyclopropane fatty acid synthase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B2H5_9DELT Tax=AR20
Methyltransferase, cyclopropane fatty acid synthase
rifcsplowo2_02_scaffold_7437_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

3490..5205
-----------------
DNA (1716bp)
protein (572aa)
sodium/hydrogen exchanger Tax=CG_Woesearch_01
Transporter, CPA2 family id=5799540 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
sodium/hydrogen exchanger
rifcsplowo2_02_scaffold_7437_8
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

comp(5207..6847)
-----------------
DNA (1641bp)
protein (547aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037DB208
Glutamate-tRNA ligase {ECO:0000313|EMBL:KKQ17609.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
Glutamate-tRNA ligase
rifcsplowo2_02_scaffold_7437_9
unknown

Not on your lists

6852..7244
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_10
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

7228..7458
-----------------
DNA (231bp)
protein (77aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036FFD38
hypothetical protein
id=5800009 Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsplowo2_02_scaffold_7437_11
unknown

Not on your lists

7460..7768
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_12
unknown

Not on your lists

7782..8219
-----------------
DNA (438bp)
protein (146aa)
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVC5_THEON id=5103729 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Putative uncharacterized protein n=1 Tax=Thermococcus onnurineus (strain NA1) RepID=B6YVC5_THEON Tax=AR20
hypothetical protein
rifcsplowo2_02_scaffold_7437_13
unknown

Not on your lists

8216..8569
-----------------
DNA (354bp)
protein (118aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_14

Not on your lists

comp(8571..9599)
-----------------
DNA (1029bp)
protein (343aa)
tRNA wybutosine-synthesizing protein 1 {ECO:0000313|EMBL:KHO49437.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Tyw1, RGD1310420, Rsafd1; tRNA-yW synthesizing protein 1 homolog (S. cerevisiae); K15449 tRNA wybutosine-synthesizing protein 1 id=5044663 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Fe-S OXIDOREDUCTASE Wyeosine biosynthesis
rifcsplowo2_02_scaffold_7437_15
GWE1_Berkelbacteria_39_12, Berkelbacteria, Bacteria

Not on your lists

9650..10534
-----------------
DNA (885bp)
protein (295aa)
hypothetical protein id=15189345 bin=GWE1_Berkelbacteria_39_12 species=ACD58_39_12 genus=ACD58_39_12 taxon_order=ACD58_39_12 taxon_class=ACD58_39_12 phylum=ACD58 tax=GWE1_Berkelbacteria_39_12 organism_group=ACD58 (Berkelbacteria) organism_desc=Complete genome (ACD58 lineage)
hypothetical protein Tax=GWE1_Berkelbacteria_39_12
rifcsplowo2_02_scaffold_7437_16
unknown

Not on your lists

10570..10935
-----------------
DNA (366bp)
protein (122aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_17
unknown

Not on your lists

comp(10926..11291)
-----------------
DNA (366bp)
protein (122aa)
Lipoprotein signal peptidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K946_HALHC id=5103724 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lipoprotein signal peptidase n=1 Tax=Halobacteroides halobius (strain ATCC 35273 / DSM 5150 / MD-1) RepID=L0K946_HALHC Tax=AR20
Lipoprotein signal peptidase
rifcsplowo2_02_scaffold_7437_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

11344..12720
-----------------
DNA (1377bp)
protein (459aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5043950 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_02_scaffold_7437_19

Not on your lists

comp(12767..13165)
-----------------
DNA (399bp)
protein (133aa)
Uncharacterized protein n=2 Tax=Cenarchaeum symbiosum RepID=O74050_CENSY id=5103566 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62847.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_7437_20
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(13189..13827)
-----------------
DNA (639bp)
protein (213aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=1392998 species=
Endonuclease III n=1 Tax=Leptotrichia buccalis (strain ATCC 14201 / DSM 1135 / JCM 12969 / NCTC 10249) RepID=C7NEH4_LEPBD
endonuclease III
rifcsplowo2_02_scaffold_7437_21
R_RIF_OD1_12_48_12, RIF-OD1-12, Parcubacteria, Bacteria

Not on your lists

comp(13811..14209)
-----------------
DNA (399bp)
protein (133aa)
Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_12_48_12_curated
rifcsplowo2_02_scaffold_7437_22
unknown

Not on your lists

comp(14234..14734)
-----------------
DNA (501bp)
protein (167aa)
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSA0_VULDI id=5103607 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QSA0_VULDI Tax=AR20
hypothetical protein
rifcsplowo2_02_scaffold_7437_23
unknown

Not on your lists

comp(14820..15254)
-----------------
DNA (435bp)
protein (145aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_24
unknown

Not on your lists

15480..15830
-----------------
DNA (351bp)
protein (117aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_25
unknown

Not on your lists

15902..16282
-----------------
DNA (381bp)
protein (127aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_26
unknown

Not on your lists

16279..16791
-----------------
DNA (513bp)
protein (171aa)

This feature has no annotations

rifcsplowo2_02_scaffold_7437_27
GWC2_CPR2_39_10, CPR2, Bacteria

Not on your lists

comp(16804..17595)
-----------------
DNA (792bp)
protein (264aa)
Endonuclease IV {ECO:0000313|EMBL:KKQ93411.1}; Flags: Fragment;; TaxID=1618345 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC2_39_10.;"
Endonuclease IV id=5799995 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Endonuclease IV
rifcsplowo2_02_scaffold_7437_28
unknown

Not on your lists

comp(17640..17948)
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

Displaying 28 items

View Taxonomy