ggKbase home page

rifcsplowo2_02_scaffold_5167

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_5167_1
unknown

Not on your lists

1..378
DNA (378bp) protein (126aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5167_2
unknown

Not on your lists

416..508
DNA (93bp) protein (31aa)

This feature has no annotations

rifcsplowo2_02_scaffold_5167_3
Lactobacillus salivarius, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

584..889
DNA (306bp) protein (102aa)
Acetyltransferase {ECO:0000313|EMBL:EGL98586.1}; TaxID=1029822 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus salivarius NIAS840.;"
rifcsplowo2_02_scaffold_5167_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

966..3554
DNA (2589bp) protein (863aa)
DEAD/H associated domain-containing protein; K03724 ATP-dependent helicase Lhr and Lhr-like helicase [EC:3.6.4.-] Tax=CG_Woesearch_02
DEAD/H associated domain protein n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D7W5_METSW id=5103576 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DEAD/H associated protein
rifcsplowo2_02_scaffold_5167_5

Not on your lists

comp(3551..3955)
DNA (405bp) protein (135aa)
Uncharacterized protein n=2 Tax=Cenarchaeum symbiosum RepID=O74050_CENSY id=5103566 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KHO51755.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein
rifcsplowo2_02_scaffold_5167_6

Not on your lists

4023..4310
DNA (288bp) protein (96aa)
Putative uncharacterized protein id=4759191 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Uncharacterized protein {ECO:0000313|EMBL:KHO48512.1}; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
protein of unknown function DUF59
rifcsplowo2_02_scaffold_5167_7

Not on your lists

comp(4307..5050)
DNA (744bp) protein (248aa)
sufC; putative ATP-dependent transporter SufC; K09013 Fe-S cluster assembly ATP-binding protein id=5046300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46101.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
FeS assembly ATPase SufC
rifcsplowo2_02_scaffold_5167_8
RBG_16_CPR_42_10_curated, Bacteria

Not on your lists

comp(5055..5420)
DNA (366bp) protein (122aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) RepID=B9KY34_THERP
NifU family SUF system FeS assembly protein; K04488 nitrogen fixation protein NifU and related proteins Tax=RBG_16_CPR_42_10_curated
NifU family SUF system FeS assembly protein
rifcsplowo2_02_scaffold_5167_9
Bacillus thermoamylovorans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5422..6651)
DNA (1230bp) protein (410aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=35841 species="Bacteria; Firmicut
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7 4.4.1.16)
Cysteine desulfurase n=1 Tax=Amphibacillus xylanus (strain ATCC 51415 / DSM 6626 / JCM 7361 / LMG 17667 / NBRC 15112 / Ep01) RepID=K0IX30_AMPXN
rifcsplowo2_02_scaffold_5167_10
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

comp(6635..7840)
DNA (1206bp) protein (402aa)
SufBD protein {ECO:0000313|EMBL:KKQ17613.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
ABC transporter permease id=4414270 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes
FeS assembly protein SufD
rifcsplowo2_02_scaffold_5167_11
RHI_OD1_Magasanikbacteria_41_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(7849..9282)
DNA (1434bp) protein (478aa)
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB Tax=RIFCSPHIGHO2_12_FULL_OD1_Magasanikbacteria_41_16_curated
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=5048371 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
rifcsplowo2_02_scaffold_5167_12
unknown

Not on your lists

comp(9257..9808)
DNA (552bp) protein (184aa)
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW id=5103548 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Iron-sulfur cluster assembly accessory protein n=2 Tax=Waddlia chondrophila RepID=D6YW49_WADCW Tax=AR20
Iron-sulfur cluster assembly accessory protein
rifcsplowo2_02_scaffold_5167_13
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

9873..10472
DNA (600bp) protein (200aa)
AsnC/Lrp family transcriptional regulator n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YW62_METPS
Transcriptional regulator {ECO:0000313|EMBL:KCZ70364.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;
AsnC/Lrp family transcriptional regulator
rifcsplowo2_02_scaffold_5167_14

Not on your lists

10475..11176
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003650638
Phosphoesterase
Phosphoesterase {ECO:0000313|EMBL:AJF62858.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_5167_15

Not on your lists

comp(11173..11601)
DNA (429bp) protein (143aa)
hypothetical protein
id=5103162 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62443.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_5167_16
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(11645..13336)
DNA (1692bp) protein (564aa)
Arginine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00123}; EC=6.1.1.19 {ECO:0000256|HAMAP-Rule:MF_00123};; Arginyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00123}; TaxID=1288971 species="Bacteria; Fir
arginyl-tRNA synthetase n=1 Tax=[Clostridium] glycolicum RepID=UPI0003748FEF rbh
argS; arginyl-tRNA synthetase
rifcsplowo2_02_scaffold_5167_17
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13361..15238)
DNA (1878bp) protein (626aa)
ATP-dependent protease Lon; K04076 Lon-like ATP-dependent protease [EC:3.4.21.-] Tax=AR17
ATP-dependent protease Lon n=1 Tax=Pyrococcus sp. (strain NA2) RepID=F4HMZ6_PYRSN id=5103160 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ATP-dependent protease Lon
rifcsplowo2_02_scaffold_5167_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15287..15550)
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003677CBE
hypothetical protein Tax=AR11
PRC-barrel protein
Displaying 18 items

View Taxonomy