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rifcsplowo2_02_scaffold_11988

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_11988_1
unknown

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1..189
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_2
unknown

Not on your lists

comp(186..326)
DNA (141bp) protein (47aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_3
Bifidobacterium biavatii, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(378..1178)
DNA (801bp) protein (267aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000313|EMBL:KFI51213.1}; TaxID=1437608 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bi
rifcsplowo2_02_scaffold_11988_4
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(1230..1520)
DNA (291bp) protein (97aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037FBD3A
diphthamide biosynthesis protein; K07561 diphthamide synthase subunit DPH2 Tax=CG_Pacearch_04
diphthamide biosynthesis protein
rifcsplowo2_02_scaffold_11988_5
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

1554..1853
DNA (300bp) protein (100aa)
methylated-DNA--protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=AR19
methylated-DNA--protein-cysteine methyltransferase id=1889011 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
methylated-DNA/protein-cysteine methyltransferase
rifcsplowo2_02_scaffold_11988_6
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(1843..2589)
DNA (747bp) protein (249aa)
putative transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:AIF83144.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Cand
TrmB family transcriptional regulator id=5044157 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_02_scaffold_11988_7
unknown

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2675..3376
DNA (702bp) protein (234aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_8
Virgibacillus sp. SK37, Virgibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(3373..3681)
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Virgibacillus halodenitrificans RepID=UPI00031F79D7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIF43984.1}; TaxID=403957 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Virgibacillus.;" source="Virgibacillus sp. SK37.;"
rifcsplowo2_02_scaffold_11988_9
unknown

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3741..4715
DNA (975bp) protein (325aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_10
unknown

Not on your lists

comp(4718..5407)
DNA (690bp) protein (230aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_11
unknown

Not on your lists

5597..6076
DNA (480bp) protein (160aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_12
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

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6078..8651
DNA (2574bp) protein (858aa)
Cell surface protein Tax=RBG_13_Bacteroidetes_42_15_curated
lipoprotein id=5045997 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_02_scaffold_11988_13
unknown

Not on your lists

comp(8661..9287)
DNA (627bp) protein (209aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_14

Not on your lists


comp(9328..10887)
DNA (1560bp) protein (520aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00284};; Phenylalanyl-tRNA synthetase beta subunit {ECO:0000256|HAMAP-Rule:MF_00284};
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Thermococcus litoralis DSM 5473 RepID=H3ZPR9_THELI id=5103639 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase beta subunit
rifcsplowo2_02_scaffold_11988_15

Not on your lists


comp(10941..12470)
DNA (1530bp) protein (510aa)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Methanobacterium sp. (strain AL-21) RepID=F0T5T3_METSL id=5103640 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Phenylalanine-tRNA ligase alpha subunit
Phenylalanine-tRNA ligase alpha subunit {ECO:0000313|EMBL:AJF62921.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_11988_16
unknown

Not on your lists

comp(12617..13168)
DNA (552bp) protein (184aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_17

Not on your lists

comp(13241..14041)
DNA (801bp) protein (267aa)
NEQ098 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MK1_NANEQ id=5102985 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62266.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_11988_18

Not on your lists

comp(14139..15254)
DNA (1116bp) protein (372aa)
Tryptophanyl-tRNA synthetase {ECO:0000313|EMBL:KHO51553.1}; EC=6.1.1.2 {ECO:0000313|EMBL:KHO51553.1};; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
tryptophanyl-tRNA synthetase (EC:6.1.1.2)
Tryptophanyl-tRNA synthetase n=1 Tax=Haladaptatus paucihalophilus DX253 RepID=E7QUZ5_9EURY
rifcsplowo2_02_scaffold_11988_19
unknown

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15361..15597
DNA (237bp) protein (79aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_20

Not on your lists

comp(15570..16361)
DNA (792bp) protein (264aa)
Putative uncharacterized protein n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EGL1_9EURY id=5103648 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62929.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_11988_21
unknown

Not on your lists

comp(16487..16615)
DNA (129bp) protein (43aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(16617..17111)
DNA (495bp) protein (165aa)
id=5044628 Tax=CG_Woesearch_02
id=5044628 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_02_scaffold_11988_23
RBG_16_OP11_39_9b_curated, Microgenomates, Bacteria

Not on your lists

17271..18278
DNA (1008bp) protein (336aa)
adenylosuccinate synthetase (EC:6.3.4.4); K01939 adenylosuccinate synthase [EC:6.3.4.4] Tax=RBG_16_OP11_39_9b_curated
adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GW67_METFV
rifcsplowo2_02_scaffold_11988_24
unknown

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18534..18812
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsplowo2_02_scaffold_11988_25
unknown

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18799..19152
DNA (354bp) protein (118aa)

This feature has no annotations

Displaying 25 items

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