ggKbase home page

rifcsplowo2_02_scaffold_4216

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_4216_1
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(3..536)
DNA (534bp) protein (178aa)
hypothetical protein Tax=CG_Pacearch_04
id=5049713 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_02_scaffold_4216_2
unknown

Not on your lists

comp(640..885)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4216_3

Not on your lists

comp(984..2336)
DNA (1353bp) protein (451aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62758.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_4216_4
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2413..4776)
DNA (2364bp) protein (788aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C06FE
Uncharacterized protein Tax=AR4
rifcsplowo2_02_scaffold_4216_5
unknown

Not on your lists

comp(4800..5825)
DNA (1026bp) protein (342aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4216_6

Not on your lists

6198..6902
DNA (705bp) protein (235aa)
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific {ECO:0000256|HAMAP-Rule:MF_01139}; EC=2.5.1.89 {ECO:0000256|HAMAP-Rule:MF_01139};; Undecaprenyl diphosphate synt
Tritrans,polycis-undecaprenyl-diphosphate synthase (geranylgeranyl-diphosphate specific n=1 Tax=Methanococcus vannielii (strain SB / ATCC 35089 / DSM 1224) RepID=A6UPZ0_METVS id=5103830 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tritrans,polycis-undecaprenyl-diphosphate synthase, geranylgeranyl-diphosphate specific
rifcsplowo2_02_scaffold_4216_7
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6896..7375)
DNA (480bp) protein (160aa)
adenylate kinase (EC:2.7.4.3) id=5045728 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
adenylate kinase (EC:2.7.4.3) Tax=AR18
Adenylate kinase
rifcsplowo2_02_scaffold_4216_8
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7389..8060)
DNA (672bp) protein (224aa)
hypothetical protein n=1 Tax=Cloacimonetes bacterium SCGC AAA252-L05 RepID=UPI000380E5E9
uridylate kinase, putative Tax=RBG_13_Pacearchaeota_33_26_curated
uridylate kinase, putative
rifcsplowo2_02_scaffold_4216_9
RBG_13_Euryarchaeota_61_15_curated, Euryarchaeota, Archaea

Not on your lists

comp(8057..8344)
DNA (288bp) protein (96aa)
hypothetical protein Tax=RBG_13_Euryarchaeota_61_15_curated
hypothetical protein; K09728 hypothetical protein id=5045726 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_02_scaffold_4216_10
unknown

Not on your lists

8451..8954
DNA (504bp) protein (168aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4216_11

Not on your lists

comp(9151..11775)
DNA (2625bp) protein (875aa)
calcium-translocating P-type ATPase (EC:3.6.3.8); K01537 Ca2+-transporting ATPase [EC:3.6.3.8] id=5043592 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Sarco/endoplasmic reticulum calcium-translocating P-type ATPase/golgi membrane calcium-translocating P-type ATPase {ECO:0000313|EMBL:KHO49592.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2
Cation transport ATPase
rifcsplowo2_02_scaffold_4216_12
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11772..12986)
DNA (1215bp) protein (405aa)
NhaP-type Na+(K+)/H+ antiporter n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6WKE2_9EURY
cvrA, nhaP2, ycgO; potassium/proton antiporter; K11105 cell volume regulation protein A Tax=CG_Woesearch_02
Na+/H+ antiporter
rifcsplowo2_02_scaffold_4216_13
R_OD1_44_24, Parcubacteria, Bacteria

Not on your lists

13098..13547
DNA (450bp) protein (150aa)
vitamin K epoxide reductase Tax=RIFCSPLOWO2_01_FULL_OD1_44_24_curated
vitamin K epoxide reductase id=5090687 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Vitamin K epoxide reductase
rifcsplowo2_02_scaffold_4216_14
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

13619..14038
DNA (420bp) protein (140aa)
thioredoxin-like protein Tax=AR6
hypothetical protein id=5097248 bin=PER_GWF2_39_17 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=PER_GWF2_39_17 organism_group=PER (Peregrinibacteria)
Vitamin K epoxide reductase
rifcsplowo2_02_scaffold_4216_15

Not on your lists

14046..14753
DNA (708bp) protein (236aa)
Cytochrome c biogenesis protein transmembrane region id=5799832 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Cytochrome c biogenesis protein transmembrane region {ECO:0000313|EMBL:AJF61163.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
cytochrome c biogenesis transmembrane protein
rifcsplowo2_02_scaffold_4216_16
R_OD1_Yanofskybacteria_45_18, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

comp(14760..15323)
DNA (564bp) protein (188aa)
prx-1; peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] Tax=RIFCSPLOWO2_02_FULL_OD1_Yanofskybacteria_45_18_curated
prx2-1; 2-cysteine peroxiredoxin (EC:1.11.1.15); K03386 peroxiredoxin (alkyl hydroperoxide reductase subunit C) [EC:1.11.1.15] id=120298 bin=ACD76 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=ACD76 organism_group=OD1 (Parcubacteria) organism_desc=OD1
peroxiredoxin
rifcsplowo2_02_scaffold_4216_17
unknown

Not on your lists

comp(15465..15809)
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsplowo2_02_scaffold_4216_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15860..16258)
DNA (399bp) protein (133aa)
hypothetical protein id=5048321 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_02_scaffold_4216_19
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(16295..17122)
DNA (828bp) protein (276aa)
zinc/iron permease id=5094582 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
zinc/iron permease Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
hypothetical protein
rifcsplowo2_02_scaffold_4216_20
unknown

Not on your lists

comp(17148..17627)
DNA (480bp) protein (160aa)

This feature has no annotations

Displaying 20 items

View Taxonomy