ggKbase home page

rifcsplowo2_02_scaffold_15856

Search features with annotation key words

Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_15856_1
unknown

Not on your lists

comp(2..703)
DNA (702bp) protein (234aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP Tax=AR20
Lytic murein transglycosylase
rifcsplowo2_02_scaffold_15856_2
unknown

Not on your lists

comp(810..3101)
DNA (2292bp) protein (764aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP Tax=AR20
Lytic murein transglycosylase
rifcsplowo2_02_scaffold_15856_3
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3094..5085)
DNA (1992bp) protein (664aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_02_scaffold_15856_4

Not on your lists

comp(5066..5281)
DNA (216bp) protein (72aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_15856_5
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

5589..6314
DNA (726bp) protein (242aa)
Tax=AR6
rifcsplowo2_02_scaffold_15856_6
unknown

Not on your lists

6318..6506
DNA (189bp) protein (63aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_7
unknown

Not on your lists

6628..6981
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_8
unknown

Not on your lists

6992..7666
DNA (675bp) protein (225aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_9
unknown

Not on your lists

7694..8098
DNA (405bp) protein (135aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_10
GWC2_WS6_36_7, WS6, Bacteria

Not on your lists

8141..8611
DNA (471bp) protein (157aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ11490.1}; TaxID=1619091 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC2_36_7.;"
rifcsplowo2_02_scaffold_15856_trna_1
unknown

Not on your lists

comp(8632..8734)
DNA (103bp)
transferRNA
rifcsplowo2_02_scaffold_15856_11
unknown

Not on your lists

comp(8720..9943)
DNA (1224bp) protein (408aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_12
GWE2_OD1_ACD81_44_13, Wolfebacteria, Parcubacteria, Bacteria

Not on your lists

comp(10076..11284)
DNA (1209bp) protein (403aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=24426612 bin=RBG_19FT_COMBO_CP_WS3-like_JS1_11 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=RBG_19FT_COMBO_CP_WS3-like_JS1_11 organism_group=Unknown_CP organism_desc=Curation Candidate WS3-like JS1- Novel phyla exclusive to Rifle. 98% similar to 16ft bin
RNA polymerase sigma factor {ECO:0000313|EMBL:KKT43795.1}; TaxID=1619017 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Wolfebacteria) bacterium GW2011_GWE2_44_13.;"
DNA-directed RNA polymerase subunit alpha
rifcsplowo2_02_scaffold_15856_13
RBG_16_Chloroflexi_57_11_curated, Chloroflexi, Bacteria

Not on your lists

comp(11399..11701)
DNA (303bp) protein (101aa)
hypothetical protein Tax=RBG_16_Chloroflexi_57_11_curated
rifcsplowo2_02_scaffold_15856_14
unknown

Not on your lists

comp(11736..12680)
DNA (945bp) protein (315aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_15
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12682..14277)
DNA (1596bp) protein (532aa)
hypothetical protein
id=5103625 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_02_scaffold_15856_16
unknown

Not on your lists

comp(14485..14973)
DNA (489bp) protein (163aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_17
unknown

Not on your lists

15136..15687
DNA (552bp) protein (184aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_18
unknown

Not on your lists

comp(15694..17292)
DNA (1599bp) protein (533aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_19
unknown

Not on your lists

comp(17237..17674)
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_20
unknown

Not on your lists

comp(17682..18812)
DNA (1131bp) protein (377aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_21
Methanoplanus limicola, Methanoplanus, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists


comp(18991..19389)
DNA (399bp) protein (133aa)
30S ribosomal protein S9 n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363BEDB
30S ribosomal protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003817}; TaxID=937775 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanomicrobiaceae; Metha
rifcsplowo2_02_scaffold_15856_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(19376..19795)
DNA (420bp) protein (140aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L13 Tax=CG_Woesearch_02
50S ribosomal protein L13P
rifcsplowo2_02_scaffold_15856_23

Not on your lists


comp(19792..20145)
DNA (354bp) protein (118aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L18e
50S ribosomal protein L18e {ECO:0000256|HAMAP-Rule:MF_00329}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_15856_24
unknown

Not on your lists

comp(20243..21217)
DNA (975bp) protein (325aa)

This feature has no annotations

rifcsplowo2_02_scaffold_15856_25
unknown

Not on your lists

comp(21249..22244)
DNA (996bp) protein (332aa)

This feature has no annotations

Displaying 26 items

View Taxonomy