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rifcsplowo2_02_scaffold_3554

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_3554_1

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comp(3..797)
DNA (795bp) protein (265aa)
Glycosyl transferase family 4 n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GU85_9EURY id=5103427 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Glycosyl transferase family 4
Glycosyl transferase family 4 {ECO:0000313|EMBL:AJF62708.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_3554_2
GWC1_CPR2_41_48, CPR2, Bacteria

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comp(935..1906)
DNA (972bp) protein (324aa)
oxidoreductase domain protein id=1758654 bin=GWD2_CPR2_39_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Candidatus Saccharibacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
Oxidoreductase domain protein {ECO:0000313|EMBL:KKS08663.1}; TaxID=1618344 species="Bacteria; candidate division CPR2.;" source="candidate division CPR2 bacterium GW2011_GWC1_41_48.;"
oxidoreductase
rifcsplowo2_02_scaffold_3554_3
RBG_16_Chloroflexi_52_11_curated, Chloroflexi, Bacteria

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1982..2566
DNA (585bp) protein (195aa)
transferase hexapeptide repeat containing protein Tax=RBG_16_Chloroflexi_52_11_curated
Putative sugar acetyltransferase id=1758656 bin=GWD2_CPR2_39_7 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hexapeptide repeat-containing transferase
rifcsplowo2_02_scaffold_3554_4
Methanosarcina siciliae, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2556..3530)
DNA (975bp) protein (325aa)
UDP-glucose 4-epimerase {ECO:0000313|EMBL:AKB35133.1}; EC=5.1.3.2 {ECO:0000313|EMBL:AKB35133.1};; TaxID=1434118 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae;
UDP-glucose 4-epimerase (EC:5.1.3.2); K01784 UDP-glucose 4-epimerase [EC:5.1.3.2] id=5043085 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
putative UDP-glucose 4-epimerase
rifcsplowo2_02_scaffold_3554_5

Not on your lists

comp(3514..4611)
DNA (1098bp) protein (366aa)
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KHO49547.1}; EC=5.1.3.14 {ECO:0000313|EMBL:KHO49547.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
UDP-N-acetylglucosamine 2-epimerase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D8A0_METSW
rifcsplowo2_02_scaffold_3554_6

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comp(4613..5350)
DNA (738bp) protein (246aa)
Dolichol-phosphate mannosyltransferase {ECO:0000313|EMBL:KHO49546.1}; EC=2.4.1.83 {ECO:0000313|EMBL:KHO49546.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
hypothetical protein n=1 Tax=Calothrix sp. PCC 7103 RepID=UPI0002F6D9F0
glycosyl transferase family 2 protein
rifcsplowo2_02_scaffold_3554_7

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comp(5391..8036)
DNA (2646bp) protein (882aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D05C0
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62718.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_3554_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(8041..8892)
DNA (852bp) protein (284aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F65A1
hypothetical protein
hypothetical protein Tax=CG_Woesearch_02
rifcsplowo2_02_scaffold_3554_9
unknown

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comp(8948..9703)
DNA (756bp) protein (252aa)
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD id=5103442 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein n=1 Tax=Caldisphaera lagunensis (strain DSM 15908 / JCM 11604 / IC-154) RepID=L0ACG9_CALLD Tax=AR20
Metal-binding-domain/4Fe-4S-binding-domain containing ABC transporter, ATP-binding protein
rifcsplowo2_02_scaffold_3554_10
unknown

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9758..10000
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3554_11
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(9997..11058)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
alpha-L-glutamate ligase; K05844 ribosomal protein S6 modification protein Tax=CG_Woesearch_02
RimK family alpha-L-glutamate ligase
rifcsplowo2_02_scaffold_3554_12
AR11, Woesearchaeaota, DPANN, Archaea

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comp(11027..11380)
DNA (354bp) protein (118aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
metalloprotease Tax=AR11
hypothetical protein
rifcsplowo2_02_scaffold_3554_13
RIFOXYB2_FULL_Peregrinibacteria_32_7_curated, Peregrinibacteria, Bacteria

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11481..12524
DNA (1044bp) protein (348aa)
hypothetical protein Tax=RIFOXYB2_FULL_Peregrinibacteria_32_7_curated
hypothetical protein id=5044164 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_02_scaffold_3554_14
unknown

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12628..14619
DNA (1992bp) protein (664aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3554_15
Candidatus Nitrosoarchaeum limnia, Candidatus Nitrosoarchaeum, Nitrosopumilales, Thaumarchaeota, Archaea

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14686..15447
DNA (762bp) protein (254aa)
Methyltransferase, FkbM family n=1 Tax=Candidatus Nitrosoarchaeum limnia BG20 RepID=S2EL18_9ARCH
Methyltransferase, FkbM family {ECO:0000313|EMBL:EPA05327.1}; TaxID=859192 species="Archaea; Thaumarchaeota; Nitrosopumilales; Nitrosopumilaceae; Candidatus Nitrosoarchaeum.;" source="Candidatus Nitro
SAM-dependent methyltransferase
rifcsplowo2_02_scaffold_3554_16
Candidatus Micrarchaeum acidiphilum, Candidatus Micrarchaeum, Parvarchaeota, Archaea

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comp(15530..16234)
DNA (705bp) protein (235aa)
Endonuclease/exonuclease/phosphatase n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DG02_9EURY
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EET90569.1}; TaxID=425595 species="Archaea; Parvarchaeota; Candidatus Micrarchaeum.;" source="Candidatus Micrarchaeum acidiphilum ARMAN-2.;"
rifcsplowo2_02_scaffold_3554_17
unknown

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16425..16904
DNA (480bp) protein (160aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3554_18
unknown

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comp(17118..17549)
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsplowo2_02_scaffold_3554_trna_1
unknown

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comp(17634..17729)
DNA (96bp)
transferRNA
rifcsplowo2_02_scaffold_3554_19
unknown

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comp(17745..18464)
DNA (720bp) protein (240aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035EC58D
UPI00019B05F4 related cluster n=1 Tax=unknown RepID=UPI00019B05F4 Tax=AR20
hypothetical protein
rifcsplowo2_02_scaffold_3554_20
unknown

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comp(18468..19175)
DNA (708bp) protein (236aa)

This feature has no annotations

Displaying 21 items

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