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rifcsplowo2_02_scaffold_21088

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_02_scaffold_21088_1
unknown

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2..484
DNA (483bp) protein (161aa)

This feature has no annotations

rifcsplowo2_02_scaffold_21088_2
unknown

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520..1563
DNA (1044bp) protein (348aa)

This feature has no annotations

rifcsplowo2_02_scaffold_21088_3
GWC2_Deltaproteobacteria_42_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1570..1899
DNA (330bp) protein (110aa)
bkdB; branched-chain 2-oxoacid dehydrogenase complex, E1 protein, beta subunit; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=GWC2_Deltaproteobacteria_42_11_curated
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
Pyruvate dehydrogenase (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=5241314 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_02_scaffold_21088_4
RBG_16_Deltaproteobacteria_47_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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1989..2441
DNA (453bp) protein (151aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_16_Deltaproteobacteria_47_11_curated
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=5048733 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
transketolase (EC:1.2.4.1)
rifcsplowo2_02_scaffold_21088_5
unknown

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2443..2775
DNA (333bp) protein (111aa)

This feature has no annotations

rifcsplowo2_02_scaffold_21088_6
RBG_16_Deltaproteobacteria_49_23_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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2777..3988
DNA (1212bp) protein (404aa)
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12); K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] Tax=RBG_16_Deltaproteobacteria_49_23_curated
hypothetical protein; K00627 pyruvate dehydrogenase E2 component (dihydrolipoamide acetyltransferase) [EC:2.3.1.12] id=5048732 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
dihydrolipoyllysine-residue acetyltransferase (EC:2.3.1.12)
rifcsplowo2_02_scaffold_21088_7
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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comp(3985..4761)
DNA (777bp) protein (259aa)
putative biotin/lipoate A/B protein ligase; K03800 lipoate-protein ligase A [EC:2.7.7.63] Tax=RBG_16_Euryarchaeota_41_19_curated
Putative biotin/lipoate A/B protein ligase n=1 Tax=Methanocella paludicola (strain DSM 17711 / JCM 13418 / NBRC 101707 / SANAE) RepID=D1YZC1_METPS
putative biotin/lipoate A/B protein ligase
rifcsplowo2_02_scaffold_21088_8

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comp(4784..6271)
DNA (1488bp) protein (496aa)
DNA-directed RNA polymerase beta subunit id=4553193 bin=GWC2_OP3_44_8 species=unknown genus=Dehalobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
Putative flagella related protein {ECO:0000313|EMBL:AAU84351.1}; TaxID=285401 species="Archaea; environmental samples.;" source="uncultured archaeon GZfos9D8.;"
type II secretion system-like protein E
rifcsplowo2_02_scaffold_21088_9
AR20, Woesearchaeaota, DPANN, Archaea

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comp(6273..6608)
DNA (336bp) protein (112aa)
hypothetical protein
id=5103702 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsplowo2_02_scaffold_21088_10
unknown

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comp(6682..6927)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_02_scaffold_21088_11
unknown

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comp(6985..7287)
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsplowo2_02_scaffold_21088_12

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comp(7360..8280)
DNA (921bp) protein (307aa)
Transcription initiation factor IIB n=4 Tax=Archaeoglobaceae RepID=TF2B_ARCFU id=5103059 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcription initiation factor IIB
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_02_scaffold_21088_13

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comp(8400..8786)
DNA (387bp) protein (129aa)
30S ribosomal protein S8e n=2 Tax=Picrophilus torridus (strain ATCC 700027 / DSM 9790 / JCM 10055 / NBRC 100828) RepID=RS8E_PICTO id=5103085 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
30S ribosomal protein S8e
rifcsplowo2_02_scaffold_21088_14
GWA2_OD1_45_21, Giovannonibacteria, Parcubacteria, Bacteria

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comp(8862..9167)
DNA (306bp) protein (102aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKU02603.1}; TaxID=1618649 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Giovannonibacteria) bacterium GW2011_GWA2_45_21.;"
transmembrane_regions id=5241304 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_02_scaffold_21088_15
R_OD1_Kaiserbacteria_52_12b, Kaiserbacteria, Parcubacteria, Bacteria

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comp(9164..9637)
DNA (474bp) protein (158aa)
hypothetical protein Tax=RIFCSPLOWO2_01_FULL_OD1_Kaiserbacteria_52_12b_curated
hypothetical protein
hypothetical protein id=5241303 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_02_scaffold_21088_16
R_OP11_Levybacteria_36_15, Levybacteria, Microgenomates, Bacteria

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comp(9677..10267)
DNA (591bp) protein (197aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2AD81_9BACT
Uncharacterized protein Tax=RIFCSPHIGHO2_01_FULL_OP11_Levybacteria_36_15_curated
hypothetical protein
rifcsplowo2_02_scaffold_21088_17
unknown

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10633..11475
DNA (843bp) protein (281aa)

This feature has no annotations

Displaying 17 items

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