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RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_1
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2..1252
-----------------
DNA (1251bp)
protein (417aa)
Nitrate reductase n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6AB21_9PROT
napA; periplasmic nitrate reductase, large subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
napA; periplasmic nitrate reductase, large subunit
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_2
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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1333..2013
-----------------
DNA (681bp)
protein (227aa)
MauM/NapG family ferredoxin-type protein n=1 Tax=Accumulibacter phosphatis (strain UW-1) RepID=C7RM79_ACCPU
napG; quinol dehydrogenase periplasmic component; K02573 ferredoxin-type protein NapG Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
napG; quinol dehydrogenase periplasmic component
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_3
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2010..2912
-----------------
DNA (903bp)
protein (301aa)
Quinol dehydrogenase membrane component n=1 Tax=Sulfuricella denitrificans skB26 RepID=S6B0I1_9PROT
napH; quinol dehydrogenase membrane component Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
napH; quinol dehydrogenase membrane component
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_4
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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2929..3423
-----------------
DNA (495bp)
protein (165aa)
Periplasmic nitrate reductase, electron transfer subunit n=1 Tax=Azospira oryzae (strain ATCC BAA-33 / DSM 13638 / PS) RepID=G8QFB5_AZOSU
nitrate reductase cytochrome c-type subunit; K02568 cytochrome c-type protein NapB Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
nitrate reductase cytochrome c-type subunit
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_5
RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated, Acidobacteria, Bacteria

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3481..5136
-----------------
DNA (1656bp)
protein (552aa)
nirS; nitrite reductase, cytochrome cd1 type (EC:1.7.2.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_67_14b_curated
nirS; nitrite reductase, cytochrome cd1 type (EC:1.7.2.1)
Nitrite reductase, cytochrome cd1 type n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MIV5_9BACT
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_6
RLO_RIF02_62_27, RIF2, Bacteria

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5146..5475
-----------------
DNA (330bp)
protein (110aa)
Gamma-carboxymuconolactone decarboxylase-like protein Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Gamma-carboxymuconolactone decarboxylase-like protein id=4019883 bin=GWC2_Methylomirabilis_70_24 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
Gamma-carboxymuconolactone decarboxylase-like protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_7
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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5806..8088
-----------------
DNA (2283bp)
protein (761aa)
molybdopterin oxidoreductase; K02567 periplasmic nitrate reductase NapA [EC:1.7.99.4] Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
Molybdopterin oxidoreductase n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME93_RHOM4
molybdopterin oxidoreductase
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_8
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

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8088..8768
-----------------
DNA (681bp)
protein (227aa)
Uncharacterized protein n=1 Tax=Rhodothermus marinus (strain ATCC 43812 / DSM 4252 / R-10) RepID=D0ME94_RHOM4
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_9
unknown

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8765..8953
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_10
RLO_RIF02_62_27, RIF2, Bacteria

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8999..9328
-----------------
DNA (330bp)
protein (110aa)
Gamma-carboxymuconolactone decarboxylase-like protein Tax=RIFCSPLOWO2_12_FULL_RIF02_62_27_curated
Gamma-carboxymuconolactone decarboxylase-like protein id=3735729 bin=GWF2_Ignavibacteria_33_9 species=unknown genus=unknown taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_33_9 organism_group=Ignavibacteria
Gamma-carboxymuconolactone decarboxylase-like protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(9342..10160)
-----------------
DNA (819bp)
protein (273aa)
Formate/nitrite transporter n=1 Tax=Opitutus terrae (strain DSM 11246 / PB90-1) RepID=B1ZVT4_OPITP
formate/nitrite transporter Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
formate/nitrite transporter
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(10252..11007)
-----------------
DNA (756bp)
protein (252aa)
hypothetical protein; K07152 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein; K07152 id=12554039 bin=CNBR_ACIDO species=Aquifex aeolicus genus=Aquifex taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(11018..12442)
-----------------
DNA (1425bp)
protein (475aa)
cytochrome c oxidase, subunit I (EC:1.9.3.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cytochrome c oxidase, subunit I (EC:1.9.3.1) id=12554038 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytochrome c oxidase, subunit I (EC:1.9.3.1)
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_14
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(12463..13467)
-----------------
DNA (1005bp)
protein (335aa)
cytochrome c oxidase, subunit II (EC:1.9.3.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cytochrome c oxidase, subunit II (EC:1.9.3.1) id=12554037 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
cytochrome c oxidase, subunit II (EC:1.9.3.1)
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

13606..13986
-----------------
DNA (381bp)
protein (127aa)
glgP; glycogen phosphorylase (EC:2.4.1.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLE1_9BACT
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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14126..15982
-----------------
DNA (1857bp)
protein (619aa)
glgP; glycogen phosphorylase (EC:2.4.1.1) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
glgP; glycogen phosphorylase (EC:2.4.1.1)
Phosphorylase n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MLE1_9BACT
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

15985..18894
-----------------
DNA (2910bp)
protein (970aa)
hypothetical protein n=1 Tax=Azoarcus toluclasticus RepID=UPI000370499B
protein serine/threonine phosphatase Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
protein serine/threonine phosphatase
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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18911..19258
-----------------
DNA (348bp)
protein (116aa)
Anti-sigma factor antagonist n=1 Tax=Isosphaera pallida (strain ATCC 43644 / DSM 9630 / IS1B) RepID=E8QZ65_ISOPI
anti-sigma-factor antagonist; K04749 anti-sigma B factor antagonist Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
anti-sigma-factor antagonist
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19291..20943
-----------------
DNA (1653bp)
protein (551aa)
transglutaminase domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Transglutaminase-like protein id=2535659 bin=GWC2_Nitrospirae-rel_56_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWC2_Nitrospirae-rel_56_14 organism_group=Nitrospirae organism_desc=Pretty good; based on recA
transglutaminase domain-containing protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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20940..21692
-----------------
DNA (753bp)
protein (251aa)
Putative ABC transporter ATP-binding protein n=1 Tax=Gemmatimonas aurantiaca (strain T-27 / DSM 14586 / JCM 11422 / NBRC 100505) RepID=C1A6K8_GEMAT
putative ABC transporter ATP-binding protein; K01990 ABC-2 type transport system ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
putative ABC transporter ATP-binding protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

21692..23380
-----------------
DNA (1689bp)
protein (563aa)
hypothetical protein; K01992 ABC-2 type transport system permease protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Putative uncharacterized protein id=3846252 bin=GWC2_Nitrospirae_57_13 species=delta proteobacterium NaphS2 genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Nitrospirae_57_13 organism_group=Nitrospirae organism_desc=Same as C1_57_7 and D2_57_8
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_22
RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated, Acidobacteria, Bacteria

Not on your lists

23715..25313
-----------------
DNA (1599bp)
protein (533aa)
ybiT; transporter fused subunits of ABC superfamily: ATP-binding components Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_66_21_curated
ybiT; transporter fused subunits of ABC superfamily: ATP-binding components id=12556707 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
ybiT; transporter fused subunits of ABC superfamily: ATP-binding components
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25374..26522
-----------------
DNA (1149bp)
protein (383aa)
Uncharacterized protein n=1 Tax=Opitutaceae bacterium TAV1 RepID=I6AWK4_9BACT
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26679..26930
-----------------
DNA (252bp)
protein (84aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_25
R_Acidobacteria_67_21, Acidobacteria, Bacteria

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27022..27306
-----------------
DNA (285bp)
protein (95aa)
Uncharacterized protein n=1 Tax=Nitrococcus mobilis Nb-231 RepID=A4BPV5_9GAMM
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_6472_26
R_Acidobacteria_67_21, Acidobacteria, Bacteria

Not on your lists

27299..27559
-----------------
DNA (261bp)
protein (87aa)
Uncharacterized protein n=1 Tax=Truepera radiovictrix (strain DSM 17093 / CIP 108686 / LMG 22925 / RQ-24) RepID=D7CX44_TRURR
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_67_21_curated
hypothetical protein
Displaying 26 items

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