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RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_1
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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174..968
-----------------
DNA (795bp)
protein (265aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZM95_9BACT
type III restriction-modification enzyme helicase subunit Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
type III restriction enzyme, res subunit
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_2
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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971..1735
-----------------
DNA (765bp)
protein (255aa)
DNA methylase N-4/N-6 (EC:2.1.1.72) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA methylase N-4/N-6 (EC:2.1.1.72)
DNA methylase N-4/N-6 n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLC6_RHOPH
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_3
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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1853..3313
-----------------
DNA (1461bp)
protein (487aa)
DNA methylase N-4/N-6 (EC:2.1.1.72) Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
DNA methylase N-4/N-6 (EC:2.1.1.72)
DNA methylase N-4/N-6 n=1 Tax=Rhodospirillum photometricum DSM 122 RepID=H6SLC6_RHOPH
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_4
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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3607..4179
-----------------
DNA (573bp)
protein (191aa)
peptidase S14 ClpP; K01358 ATP-dependent Clp protease, protease subunit [EC:3.4.21.92] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
UPI0003CE9783 related cluster n=1 Tax=unknown RepID=UPI0003CE9783
peptidase S14 ClpP
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_5
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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4282..4578
-----------------
DNA (297bp)
protein (99aa)
Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_6
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(4464..5138)
-----------------
DNA (675bp)
protein (225aa)
Nuclease (SNase domain-containing protein) n=1 Tax=Desulfococcus multivorans DSM 2059 RepID=S7T9H7_DESML
nuclease Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
nuclease
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_7
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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5189..5533
-----------------
DNA (345bp)
protein (115aa)
Putative uncharacterized protein n=1 Tax=Desulfotomaculum kuznetsovii (strain DSM 6115 / VKM B-1805 / 17) RepID=F6CHM7_DESK7
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_8
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(5549..6166)
-----------------
DNA (618bp)
protein (206aa)
alkaline phosphatase D-related protein; K01113 alkaline phosphatase D [EC:3.1.3.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
Alkaline phosphatase n=1 Tax=Natrinema pallidum DSM 3751 RepID=L9YJS7_9EURY
alkaline phosphatase D-related protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_9
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(6184..7311)
-----------------
DNA (1128bp)
protein (376aa)
Uncharacterized protein n=1 Tax=Terriglobus saanensis (strain ATCC BAA-1853 / DSM 23119 / SP1PR4) RepID=E8V343_TERSS
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_10
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(7346..8518)
-----------------
DNA (1173bp)
protein (391aa)
Cobalamin B12-binding domain protein n=1 Tax=Granulicella mallensis (strain ATCC BAA-1857 / DSM 23137 / MP5ACTX8) RepID=G8NRF8_GRAMM
cobalamin B12-binding domain-containing protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
cobalamin B12-binding domain-containing protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_11
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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8646..9647
-----------------
DNA (1002bp)
protein (334aa)
Putative phosphohydrolase n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QV64_9BRAD
metallophosphoesterase; K07098 Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
metallophosphoesterase
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_12
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(9600..10088)
-----------------
DNA (489bp)
protein (163aa)
Putative integral membrane protein DUF46 n=1 Tax=Bradyrhizobium sp. WSM1253 RepID=I2QV63_9BRAD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_13
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(10127..10417)
-----------------
DNA (291bp)
protein (97aa)
hypothetical protein n=1 Tax=Cupriavidus sp. WS RepID=UPI00037FAD5E
putative ankyrin repeat protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ankyrin
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_14
Cystobacter violaceus, Cystobacter, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(10496..11641)
-----------------
DNA (1146bp)
protein (382aa)
Catalase {ECO:0000256|RuleBase:RU000498}; EC=1.11.1.6 {ECO:0000256|RuleBase:RU000498};; TaxID=1406225 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Cystobacterineae; Cystobacte
Catalase n=1 Tax=Cystobacter fuscus DSM 2262 RepID=S9QPD1_9DELT
katA; catalase
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_15
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

11881..12321
-----------------
DNA (441bp)
protein (147aa)
Ferric uptake regulator, Fur family n=1 Tax=Alicyclobacillus acidocaldarius LAA1 RepID=B7DUF1_9BACL
ferric uptake regulator, Fur family; K09825 Fur family transcriptional regulator, peroxide stress response regulator Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
ferric uptake regulator family protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_16
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

12528..13109
-----------------
DNA (582bp)
protein (194aa)
2OG-Fe(II) oxygenase n=2 Tax=unclassified T4-like viruses RepID=H8ZMC4_9CAUD
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_17
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(13298..16591)
-----------------
DNA (3294bp)
protein (1098aa)
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5); K01955 carbamoyl-phosphate synthase large subunit [EC:6.3.5.5] id=12555197 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
carbamoyl-phosphate synthase large subunit (EC:6.3.5.5)
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_18
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

comp(16685..17809)
-----------------
DNA (1125bp)
protein (375aa)
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5); K01956 carbamoyl-phosphate synthase small subunit [EC:6.3.5.5] id=12555196 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
carbamoyl-phosphate synthase small subunit (EC:6.3.5.5)
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_19
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

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comp(17940..19601)
-----------------
DNA (1662bp)
protein (554aa)
serine/threonine protein kinase-like protein; K08884 serine/threonine protein kinase, bacterial [EC:2.7.11.1] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein n=1 Tax=Mycobacterium sp. 155 RepID=UPI00036095F2
putative serine/threonine protein kinase
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_20
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

19707..21125
-----------------
DNA (1419bp)
protein (473aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555195 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_21
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

21067..21303
-----------------
DNA (237bp)
protein (79aa)
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein id=12555195 bin=CNBR_ACIDO species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_22
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

21300..23678
-----------------
DNA (2379bp)
protein (793aa)
penicillin-binding protein 1A; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
penicillin-binding protein 1A; K05365 penicillin-binding protein 1B [EC:2.4.1.129 3.4.-.-] id=12555188 bin=CNBR_ACIDO tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
penicillin-binding protein 1A
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_23
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

23895..24824
-----------------
DNA (930bp)
protein (310aa)
Putative uncharacterized protein n=1 Tax=Koribacter versatilis (strain Ellin345) RepID=Q1INA2_KORVE
hypothetical protein; K07402 xanthine dehydrogenase accessory factor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_24
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

24930..25964
-----------------
DNA (1035bp)
protein (345aa)
hrcA; Heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
hrcA; heat-inducible transcription repressor HrcA; K03705 heat-inducible transcriptional repressor id=12555187 bin=CNBR_ACIDO species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1?
HrcA family transcriptional regulator
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_25
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

25969..26514
-----------------
DNA (546bp)
protein (182aa)
Protein GrpE n=1 Tax=Thermobacillus composti (strain DSM 18247 / JCM 13945 / KWC4) RepID=L0EFC3_THECK
molecular chaperone GrpE Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
molecular chaperone GrpE
RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_3454_26
RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated, Acidobacteria, Bacteria

Not on your lists

26511..27659
-----------------
DNA (1149bp)
protein (383aa)
Chaperone protein DnaJ n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LJ62_CHLTF
chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_Acidobacteria_65_11_curated
chaperone protein DnaJ
Displaying 26 items

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