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RIFCSPLOWO2_02_FULL_Acidobacteria_64_15_rifcsplowo2_02_scaffold_5254_20

Organism: Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15

near complete RP 50 / 55 MC: 1 BSCG 50 / 51 MC: 2 ASCG 14 / 38 MC: 1
Location: comp(22000..22479)

Top 3 Functional Annotations

Value Algorithm Source
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Acidobacteria_65_29_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 101.0
  • Bit_score: 183
  • Evalue 2.40e-43
rnp-1 like RNA-binding protein id=12554817 bin=CNBR_ACIDO species=Limnohabitans sp. Rim28 genus=Limnohabitans taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=CNBR_ACIDO organism_group=Acidobacteria organism_desc=why is coverage listed as 1? similarity UNIREF
DB: UNIREF100
  • Identity: 60.4
  • Coverage: 106.0
  • Bit_score: 116
  • Evalue 1.90e-23
RNP-1 like RNA-binding protein similarity KEGG
DB: KEGG
  • Identity: 45.9
  • Coverage: 133.0
  • Bit_score: 114
  • Evalue 2.10e-23

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Taxonomy

R_Acidobacteria_65_29 → Acidobacteria → Bacteria

Sequences

DNA sequence
Length: 480
ATGGGTCGAAGGTTGTACGTCGGAAATCTCCCTTACACCACCGGGGAAGCGGAGTTGCAGGAGCTGTTCGCCCGTGCGGGCACGGTCGAGTCGGTCCGGGTGATGCGCGATGCCGCGACGGGACGTGCGCGCGGGTTTGCGTTCGTCGAGATGTCGACCGACGAAGAGGCGCAGAAGGCGGCCACTGAGCTCAATCAGTATCAGCTCGGCGGACGGGCGCTGACCGTCAACGAGGCGAAGCCCAAGCCCGAAGGCGGGTTTGGCGGCGGTGGTGGCTACGGCGGCAATCGCGGCGGTGGTGGCnnnnnnnnnnnnnnnnnnnnnnnnnnnnCGCGAGCCGCGCTGGTAGAATCGCAGTCTTCGCGGGGGCCCCGCAGCGACGTTCTGTTCTGGATACGCGCGAGCGCCACGGTGCGAGCGCGTCAGCGAGTGGGGGCAGCCTTGAGCCAAACGCGTGGGGGTGGGGCCCCACGCGACTGA
PROTEIN sequence
Length: 160
MGRRLYVGNLPYTTGEAELQELFARAGTVESVRVMRDAATGRARGFAFVEMSTDEEAQKAATELNQYQLGGRALTVNEAKPKPEGGFGGGGGYGGNRGGGGXXXXXXXXXXRAALVESQSSRGPRSDVLFWIRASATVRARQRVGAALSQTRGGGAPRD*