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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1..654
DNA (654bp) protein (218aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

704..1633
DNA (930bp) protein (310aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1949..2383)
DNA (435bp) protein (145aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2798..3121)
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:398 RepID=R7A919_9ACTN
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4433..5875
DNA (1443bp) protein (481aa)
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
gltD; glutamate synthase [NADPH] small chain (EC:1.4.1.13)
Glutamate synthase [NADPH] small chain, (NADPH-GOGAT) n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MM41_9BACT
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5939..6451
DNA (513bp) protein (171aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626251 bin=bin7_NC10_sister species=16ft_combo_ws3 genus=16ft_combo_ws3 taxon_order=16ft_combo_ws3 taxon_class=16ft_combo_ws3 phylum=WS3 tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6538..7248)
DNA (711bp) protein (237aa)
hypothetical protein; K09162 hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626249 bin=bin7_NC10_sister species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7249..8271)
DNA (1023bp) protein (341aa)
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
moaA; molybdenum cofactor biosynthesis protein A; K03639 molybdenum cofactor biosynthesis protein id=14626248 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
moaA; molybdenum cofactor biosynthesis protein A
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8268..8573)
DNA (306bp) protein (102aa)
dioxygenase, ferredoxin subunit Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
dioxygenase, ferredoxin subunit id=14626247 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
dioxygenase, ferredoxin subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8598..10316)
DNA (1719bp) protein (573aa)
radical SAM protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
radical SAM protein id=14626246 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
radical SAM domain-containing iron-sulfur cluster-binding oxidoreductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10399..11778)
DNA (1380bp) protein (460aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626245 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_12
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(11854..12291)
DNA (438bp) protein (146aa)
hypothetical protein id=14626244 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_trna_3
unknown

Not on your lists

comp(12335..12420)
DNA (86bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_trna_2
unknown

Not on your lists

comp(12451..12523)
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_trna_1
unknown

Not on your lists

comp(12543..12614)
DNA (72bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12677..13675)
DNA (999bp) protein (333aa)
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=14626243 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
galactose-1-phosphate uridylyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13676..14710)
DNA (1035bp) protein (345aa)
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
gpsA; glycerol-3-phosphate dehydrogenase (NAD(P)+); K00057 glycerol-3-phosphate dehydrogenase (NAD(P)+) [EC:1.1.1.94] id=14626242 bin=bin7_NC10_sister species=Geobacter sulfurreducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
gpsA; glycerol-3-phosphate dehydrogenase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14707..15318)
DNA (612bp) protein (204aa)
Glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Glycerol-3-phosphate acyltransferase; K08591 glycerol-3-phosphate acyltransferase PlsY [EC:2.3.1.15] id=14626241 bin=bin7_NC10_sister species=Thermus sp. CCB_US3_UF1 genus=Thermus taxon_order=Thermales taxon_class=Deinococci phylum=Deinococcus-Thermus tax=bin7_NC10_sister organism_group=NC10
Glycerol-3-phosphate acyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15309..15887)
DNA (579bp) protein (193aa)
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5) id=14626240 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
pgsA; CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (Phosphatidylglycerophosphate synthase) (PGP synthase) (EC:2.7.8.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15949..16668)
DNA (720bp) protein (240aa)
2-phosphosulfolactate phosphatase (EC:3.1.3.71); K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-phosphosulfolactate phosphatase (EC:3.1.3.71); K05979 2-phosphosulfolactate phosphatase [EC:3.1.3.71] id=14626239 bin=bin7_NC10_sister species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
2-phosphosulfolactate phosphatase (EC:3.1.3.71)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16673..17884)
DNA (1212bp) protein (404aa)
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5) id=14626238 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argG; Argininosuccinate synthase (Citrulline--aspartate ligase) (EC:6.3.4.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17892..18098)
DNA (207bp) protein (69aa)
id=14626237 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626237 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18172..19089)
DNA (918bp) protein (306aa)
argF; ornithine carbamoyltransferase (EC:2.1.3.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
argF; ornithine carbamoyltransferase (EC:2.1.3.3) id=14626236 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argF; ornithine carbamoyltransferase (EC:2.1.3.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19103..20293)
DNA (1191bp) protein (397aa)
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11) id=14626235 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
argD; acetylornithine transaminase (NAcOATase and DapATase), PLP-dependent (EC:2.6.1.17 2.6.1.11)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20304..21185)
DNA (882bp) protein (294aa)
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
acetylglutamate kinase (EC:2.7.2.8); K00930 acetylglutamate kinase [EC:2.7.2.8] id=14626234 bin=bin7_NC10_sister species=Desulfurobacterium sp. TC5-1 genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=bin7_NC10_sister organism_group=NC10
acetylglutamate kinase (EC:2.7.2.8)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21237..22610)
DNA (1374bp) protein (458aa)
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein id=14626233 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hslU; ATPase component of the HslUV protease, also functions as molecular chaperone; heat shock protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22607..23146)
DNA (540bp) protein (180aa)
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATP-dependent protease peptidase subunit; K01419 ATP-dependent HslUV protease, peptidase subunit HslV [EC:3.4.25.2] id=14626232 bin=bin7_NC10_sister species=Moorella thermoacetica genus=Moorella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ATP-dependent protease peptidase subunit
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23143..24054)
DNA (912bp) protein (304aa)
site-specific recombinase, XerC; K03733 integrase/recombinase XerC Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
site-specific recombinase, XerC; K03733 integrase/recombinase XerC id=14626231 bin=bin7_NC10_sister species=Geobacter bemidjiensis genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
recombinase XerC
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_14703_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(24051..24533)
DNA (483bp) protein (161aa)
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DNA topoisomerase I (EC:5.99.1.2); K03168 DNA topoisomerase I [EC:5.99.1.2] id=14626230 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
DNA topoisomerase I (EC:5.99.1.2)
Displaying 29 items

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