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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2..781)
-----------------
DNA (780bp)
protein (260aa)
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
malate dehydrogenase; K00027 malate dehydrogenase (oxaloacetate-decarboxylating) [EC:1.1.1.38] id=14625079 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Malic enzyme
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(822..977)
-----------------
DNA (156bp)
protein (52aa)
id=14625080 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625080 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1123..1245)
-----------------
DNA (123bp)
protein (41aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1507..1740)
-----------------
DNA (234bp)
protein (78aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2203..2436)
-----------------
DNA (234bp)
protein (78aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3073..3432)
-----------------
DNA (360bp)
protein (120aa)
RNP-1 like RNA-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RNP-1 like RNA-binding protein id=14625082 bin=bin7_NC10_sister species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RNP-1 like RNA-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3604..3807)
-----------------
DNA (204bp)
protein (68aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3804..4184)
-----------------
DNA (381bp)
protein (127aa)
id=14625083 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
id=14625083 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4353..4904)
-----------------
DNA (552bp)
protein (184aa)
id=14625084 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625084 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5008..6375)
-----------------
DNA (1368bp)
protein (456aa)
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Fis family transcriptional regulator; K02481 two-component system, NtrC family, response regulator id=14625085 bin=bin7_NC10_sister species=Carboxydothermus hydrogenoformans genus=Carboxydothermus taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6488..9583)
-----------------
DNA (3096bp)
protein (1032aa)
multi-sensor hybrid histidine kinase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
multi-sensor hybrid histidine kinase id=14625086 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
multi-sensor hybrid histidine kinase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9636..11234)
-----------------
DNA (1599bp)
protein (533aa)
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
N-acyl-D-amino-acid deacylase; K06015 N-acyl-D-amino-acid deacylase [EC:3.5.1.81] id=14625087 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
N-acyl-D-amino-acid deacylase (EC:3.5.1.81)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11244..13100)
-----------------
DNA (1857bp)
protein (619aa)
3-ketoacyl-ACP synthase III (EC:2.3.1.180) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
3-ketoacyl-ACP synthase III (EC:2.3.1.180) id=14625088 bin=bin7_NC10_sister species=Geodermatophilus obscurus genus=Geodermatophilus taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
3-ketoacyl-ACP synthase III (EC:2.3.1.180)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_14
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(13115..13885)
-----------------
DNA (771bp)
protein (257aa)
Amidase Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Amidase id=14625089 bin=bin7_NC10_sister species=Sphaerobacter thermophilus genus=Sphaerobacter taxon_order=Sphaerobacterales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
amidase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14439..16289)
-----------------
DNA (1851bp)
protein (617aa)
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase; K00547 homocysteine S-methyltransferase [EC:2.1.1.10] id=14625090 bin=bin7_NC10_sister species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=bin7_NC10_sister organism_group=NC10
bifunctional homocysteine S-methyltransferase/5,10-methylenetetrahydrofolate reductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16289..16813)
-----------------
DNA (525bp)
protein (175aa)
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
shikimate kinase; K00891 shikimate kinase [EC:2.7.1.71] id=14625091 bin=bin7_NC10_sister species=Symbiobacterium thermophilum genus=Symbiobacterium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
Shikimate kinase (EC:2.7.1.71)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_17
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(16838..17572)
-----------------
DNA (735bp)
protein (245aa)
vitamin B12-dependent methionine synthase (EC:2.1.1.13) Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
vitamin B12-dependent methionine synthase (EC:2.1.1.13)
Vitamin B12 dependent methionine synthase, activation domain protein id=14625092 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17697..18620)
-----------------
DNA (924bp)
protein (308aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625093 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18629..19303)
-----------------
DNA (675bp)
protein (225aa)
methyltransferase cognate corrinoid protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
methyltransferase cognate corrinoid protein id=14625094 bin=bin7_NC10_sister species=Mahella australiensis genus=Mahella taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
methyltransferase cognate corrinoid protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19429..20517)
-----------------
DNA (1089bp)
protein (363aa)
id=14625095 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625095 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20533..21834)
-----------------
DNA (1302bp)
protein (434aa)
secreted salivary gland peptide, putative Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
secreted salivary gland peptide, putative id=14625096 bin=bin7_NC10_sister species=Arctogadus glacialis genus=Arctogadus taxon_order=Gadiformes taxon_class=Actinopterygii phylum=Chordata tax=bin7_NC10_sister organism_group=NC10
highly repetitive protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22170..22928)
-----------------
DNA (759bp)
protein (253aa)
id=14625097 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625097 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23230..23598)
-----------------
DNA (369bp)
protein (123aa)
id=14625097 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14625097 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_13793_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23900..24058)
-----------------
DNA (159bp)
protein (53aa)
secreted salivary gland peptide, putative Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
secreted salivary gland peptide, putative id=14625096 bin=bin7_NC10_sister species=Arctogadus glacialis genus=Arctogadus taxon_order=Gadiformes taxon_class=Actinopterygii phylum=Chordata tax=bin7_NC10_sister organism_group=NC10
Displaying 24 items

View Taxonomy