ggKbase home page

RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011

Search features with annotation key words

Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1..75
-----------------
DNA (75bp)
protein (25aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1009..1257)
-----------------
DNA (249bp)
protein (83aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1904..2452)
-----------------
DNA (549bp)
protein (183aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14627914 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2511..3440)
-----------------
DNA (930bp)
protein (310aa)
rbsK; ribokinase (EC:2.7.1.15) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rbsK; ribokinase (EC:2.7.1.15) id=14627913 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
rbsK; ribokinase (EC:2.7.1.15)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3422..4402)
-----------------
DNA (981bp)
protein (327aa)
inosine-uridine preferring nucleoside hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inosine-uridine preferring nucleoside hydrolase id=14627912 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
inosine-uridine preferring nucleoside hydrolase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

4528..4698
-----------------
DNA (171bp)
protein (57aa)
id=14627911 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627911 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4637..5935)
-----------------
DNA (1299bp)
protein (433aa)
acetyl-CoA hydrolase (EC:2.8.3.-) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
acetyl-CoA hydrolase (EC:2.8.3.-) id=14627910 bin=bin7_NC10_sister species=Anaerostipes caccae genus=Anaerostipes taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
acetyl-CoA hydrolase (EC:2.8.3.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

5968..7515
-----------------
DNA (1548bp)
protein (516aa)
oxidoreductase-like protein; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
oxidoreductase-like protein; K09461 anthraniloyl-CoA monooxygenase [EC:1.14.13.40] id=14627909 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
oxidoreductase-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7545..8309
-----------------
DNA (765bp)
protein (255aa)
3-oxoacyl-[acyl-carrier-protein] reductase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative 3-oxoacyl-[acyl-carrier-protein] reductase id=4048086 bin=GWA2_Methylomirabilis_73_35 species=Sorangium cellulosum genus=Sorangium taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
3-oxoacyl-ACP reductase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8483..8890
-----------------
DNA (408bp)
protein (136aa)
putative translation initiation inhibitor, yjgF family Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Endoribonuclease L-PSP id=4895020 bin=GWC2_Methylomirabilis_70_16 species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
putative translation initiation inhibitor, yjgF family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8948..10585
-----------------
DNA (1638bp)
protein (546aa)
acid-thiol ligase (EC:6.2.1.-); K08295 2-aminobenzoate-CoA ligase [EC:6.2.1.32] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
acid-thiol ligase (EC:6.2.1.-)
Benzoate-CoA ligase family id=4895049 bin=GWC2_Methylomirabilis_70_16 species=Microvirga sp. WSM3557 genus=Microvirga taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

10653..11897
-----------------
DNA (1245bp)
protein (415aa)
Receptor family ligand-binding protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F7F9_9DELT
extracellular ligand-binding receptor; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
extracellular ligand-binding receptor
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12043..12666
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Uncharacterized protein id=4385644 bin=GWC2_Methylomirabilis_70_24 species=unknown genus=Methylocystis taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12711..13361
-----------------
DNA (651bp)
protein (217aa)
Histidine kinase (EC:2.7.13.3) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Histidine kinase (EC:2.7.13.3) id=14627953 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Histidine kinase (EC:2.7.13.3)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13922..14824
-----------------
DNA (903bp)
protein (301aa)
ATPase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ATPase id=14627952 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Marinimicrobia tax=bin7_NC10_sister organism_group=NC10
ATPase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14828..15235)
-----------------
DNA (408bp)
protein (136aa)
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
2-nitropropane dioxygenase; K00459 nitronate monooxygenase [EC:1.13.12.16] id=14627950 bin=bin7_NC10_sister species=Burkholderia ambifaria genus=Burkholderia taxon_order=Burkholderiales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
2-nitropropane dioxygenase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15273..15533
-----------------
DNA (261bp)
protein (87aa)
id=14627949 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627949 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15579..15998
-----------------
DNA (420bp)
protein (140aa)
id=14627948 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14627948 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_7011_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16007..16135
-----------------
DNA (129bp)
protein (43aa)
phospholipid/glycerol acyltransferase id=14627947 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
phospholipid/glycerol acyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Displaying 19 items

View Taxonomy