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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733

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Displaying items 1-30 of 43 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2..634)
DNA (633bp) protein (211aa)
molybdopterin oxidoreductase 4Fe-4S ferredoxin Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
molybdopterin oxidoreductase 4Fe-4S ferredoxin id=14625218 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
molybdopterin oxidoreductase 4Fe-4S ferredoxin
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(894..1316)
DNA (423bp) protein (141aa)
arsC; protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) (EC:1.20.4.- 3.1.3.48) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
arsC; protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) (EC:1.20.4.- 3.1.3.48) id=14625217 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
arsC; protein arsC (Arsenical pump modifier) (Low molecular weight protein-tyrosine-phosphatase) (EC:1.20.4.- 3.1.3.48)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1313..2395)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Candidatus Methylomirabilis oxyfera RepID=D5MEK7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2399..3355)
DNA (957bp) protein (319aa)
ABC transporter permease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14625214 bin=bin7_NC10_sister species=Alicyclobacillus pohliae genus=Alicyclobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3352..4215)
DNA (864bp) protein (288aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=14625213 bin=bin7_NC10_sister species=Haloterrigena turkmenica genus=Haloterrigena taxon_order=Halobacteriales taxon_class=Halobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4219..4926)
DNA (708bp) protein (236aa)
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter-like protein; K01996 branched-chain amino acid transport system ATP-binding protein id=14625212 bin=bin7_NC10_sister species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4926..5630)
DNA (705bp) protein (235aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=14625211 bin=bin7_NC10_sister species=Methylobacterium radiotolerans genus=Methylobacterium taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_8
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(5745..6074)
DNA (330bp) protein (110aa)
amino acid/amide ABC transporter substrate-binding protein, HAAT family Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
amino acid/amide ABC transporter substrate-binding protein, HAAT family id=14625210 bin=bin7_NC10_sister species=Afipia sp. 1NLS2 genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
amino acid/amide ABC transporter substrate-binding protein, HAAT family
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6202..6417
DNA (216bp) protein (72aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7223..7873)
DNA (651bp) protein (217aa)
isochorismatase hydrolase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
isochorismatase hydrolase id=14625208 bin=bin7_NC10_sister species=Rubrobacter xylanophilus genus=Rubrobacter taxon_order=Rubrobacterales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
isochorismatase hydrolase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_11
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(7878..8864)
DNA (987bp) protein (329aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14625207 bin=bin7_NC10_sister species=Pseudomonas aeruginosa genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8878..9375)
DNA (498bp) protein (166aa)
hypothetical protein id=14625206 bin=bin7_NC10_sister species=Sphingomonas sp. TTNP3 genus=Sphingomonas taxon_order=Sphingomonadales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hydroxyquinol 1,2-dioxygenase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9512..9886)
DNA (375bp) protein (125aa)
hypothetical protein; K07460 putative endonuclease Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein; K07460 putative endonuclease id=14625205 bin=bin7_NC10_sister species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9971..10429)
DNA (459bp) protein (153aa)
intradiol ring-cleavage dioxygenase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
intradiol ring-cleavage dioxygenase id=14625204 bin=bin7_NC10_sister species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
intradiol ring-cleavage dioxygenase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10426..11055)
DNA (630bp) protein (210aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] id=14625203 bin=bin7_NC10_sister species=Geobacter lovleyi genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
rnhB; ribonuclease HII (EC:3.1.26.4)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(11197..11580)
DNA (384bp) protein (128aa)
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
50S ribosomal protein L19; K02884 large subunit ribosomal protein L19 id=14625202 bin=bin7_NC10_sister species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
50S ribosomal protein L19
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11701..12438)
DNA (738bp) protein (246aa)
tRNA (guanine-N1)-methyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
tRNA (guanine-N1)-methyltransferase id=14625201 bin=bin7_NC10_sister species=Thermobacillus composti genus=Thermobacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
tRNA (guanine-N1)-methyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12435..13010)
DNA (576bp) protein (192aa)
rimM; 16S rRNA processing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
16S rRNA-processing protein RimM; K02860 16S rRNA processing protein RimM id=14625200 bin=bin7_NC10_sister species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
rimM; 16S rRNA processing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(13014..13202)
DNA (189bp) protein (63aa)
30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rpsP; 30S ribosomal protein S16; K02959 small subunit ribosomal protein S16 id=14625199 bin=bin7_NC10_sister species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13975..14649
DNA (675bp) protein (225aa)
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase n=1 Tax=Brachybacterium paraconglomeratum RepID=UPI00026C6F86
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14675..15337)
DNA (663bp) protein (221aa)
HAD-superfamily hydrolase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] id=14625197 bin=bin7_NC10_sister species=Desmospora sp. 8437 genus=Desmospora taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
HAD-superfamily hydrolase; K01783 ribulose-phosphate 3-epimerase [EC:5.1.3.1] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
rpe; Ribulose-phosphate 3-epimerase (EC:5.1.3.1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15437..15757
DNA (321bp) protein (107aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_23
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

15742..16359
DNA (618bp) protein (206aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
Putative uncharacterized protein id=3502081 bin=GWC2_Methylomirabilis_70_16 species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16356..17720)
DNA (1365bp) protein (455aa)
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
sun protein; K03500 16S rRNA (cytosine967-C5)-methyltransferase [EC:2.1.1.176] id=14625196 bin=bin7_NC10_sister species=Thermodesulfatator indicus genus=Thermodesulfatator taxon_order=Thermodesulfobacteriales taxon_class=Thermodesulfobacteria phylum=Thermodesulfobacteria tax=bin7_NC10_sister organism_group=NC10
sun protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17717..18643)
DNA (927bp) protein (309aa)
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=14625195 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(18758..19279)
DNA (522bp) protein (174aa)
peptide deformylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
peptide deformylase id=14625194 bin=bin7_NC10_sister species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
peptide deformylase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19276..21096)
DNA (1821bp) protein (607aa)
primosomal protein N''; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
primosomal protein N''; K04066 primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:3.6.4.-] id=14625193 bin=bin7_NC10_sister species=Spirochaeta africana genus=Spirochaeta taxon_order=Spirochaetales taxon_class=Spirochaetia phylum=Spirochaetes tax=bin7_NC10_sister organism_group=NC10
primosomal protein N''
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21093..21776)
DNA (684bp) protein (228aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625192 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21780..23000)
DNA (1221bp) protein (407aa)
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] Tax=RIFCS
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5); K13038 phosphopantothenoylcysteine decarboxylase / phosphopantothenate--cysteine ligase [EC:4.1.1.36 6.3.2.5] id=14625191 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
coaBC; coenzyme A biosynthesis bifunctional protein coaBC (EC:4.1.1.36 6.3.2.5)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_4733_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23056..23262)
DNA (207bp) protein (69aa)
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
DNA-directed RNA polymerase subunit omega; K03060 DNA-directed RNA polymerase subunit omega [EC:2.7.7.6] id=14625190 bin=bin7_NC10_sister species=Pelosinus fermentans genus=Pelosinus taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
DNA-directed RNA polymerase subunit omega
Displaying items 1-30 of 43 in total

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