ggKbase home page

RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722

Search features with annotation key words

Displaying 30 items
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

3..251
DNA (249bp) protein (83aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

283..573
DNA (291bp) protein (97aa)
prevent-host-death protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Prevent-host-death protein id=3964700 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Poribacteria sp. WGA-A3 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
prevent-host-death protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

570..956
DNA (387bp) protein (129aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626718 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Poribacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(992..1366)
DNA (375bp) protein (125aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626717 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1576..2046)
DNA (471bp) protein (157aa)
YbaK/prolyl-tRNA synthetase associated domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
YbaK/prolyl-tRNA synthetase associated domain-containing protein id=14626715 bin=bin7_NC10_sister species=Chlorobium ferrooxidans genus=Chlorobium taxon_order=Chlorobiales taxon_class=Chlorobia phylum=Chlorobi tax=bin7_NC10_sister organism_group=NC10
YbaK/prolyl-tRNA synthetase associated domain-containing protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2129..3115)
DNA (987bp) protein (329aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626714 bin=bin7_NC10_sister species=Pseudomonas putida genus=Pseudomonas taxon_order=Pseudomonadales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
membrane protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3384..3827)
DNA (444bp) protein (148aa)
id=14626712 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
id=14626712 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


comp(3835..7701)
DNA (3867bp) protein (1289aa)
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
methionyl-tRNA synthetase (EC:6.1.1.10); K01874 methionyl-tRNA synthetase [EC:6.1.1.10] id=14626711 bin=bin7_NC10_sister species=Syntrophus aciditrophicus genus=Syntrophus taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
methionyl-tRNA synthetase (EC:6.1.1.10)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7691..8323)
DNA (633bp) protein (211aa)
tmk; thymidylate kinase (EC:2.7.4.9); K00943 dTMP kinase [EC:2.7.4.9] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
thymidylate kinase; K00943 dTMP kinase [EC:2.7.4.9] id=14626708 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
tmk; thymidylate kinase (EC:2.7.4.9)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8347..9480)
DNA (1134bp) protein (378aa)
histone deacetylase/AcuC/AphA family protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
histone deacetylase/AcuC/AphA family protein id=14626707 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
histone deacetylase/AcuC/AphA family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9477..9992)
DNA (516bp) protein (172aa)
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
moaC; molybdenum cofactor biosynthesis protein C; K03637 molybdenum cofactor biosynthesis protein C id=14626706 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
moaC; molybdenum cofactor biosynthesis protein C
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10019..10261)
DNA (243bp) protein (81aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626705 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10422..11273)
DNA (852bp) protein (284aa)
alpha/beta hydrolase fold protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
alpha/beta hydrolase fold protein id=14626704 bin=bin7_NC10_sister species=Kyrpidia tusciae genus=Kyrpidia taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
alpha/beta hydrolase fold protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11270..12388)
DNA (1119bp) protein (373aa)
Tungsten transporter ATP binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Tungsten transporter ATP binding protein id=14626703 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Tungsten transporter ATP binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(12385..13506)
DNA (1122bp) protein (374aa)
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative ABC transporter ATP-binding protein; K02017 molybdate transport system ATP-binding protein [EC:3.6.3.29] id=14626702 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter ATP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(13508..14044)
DNA (537bp) protein (179aa)
chromate transporter; K07240 chromate transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
chromate transporter; K07240 chromate transporter id=14626701 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
chromate transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14038..14565)
DNA (528bp) protein (176aa)
chromate ion transporter Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
chromate transporter; K07240 chromate transporter id=14626701 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=bin7_NC10_sister organism_group=NC10
chromate ion transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(14568..15221)
DNA (654bp) protein (218aa)
ABC transporter permease; K02018 molybdate transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter permease; K02018 molybdate transport system permease protein id=14626700 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ABC transporter permease
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(15221..15991)
DNA (771bp) protein (257aa)
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative ABC transporter substrate binding protein; K02020 molybdate transport system substrate-binding protein id=14626699 bin=bin7_NC10_sister species=Caldilinea aerophila genus=Caldilinea taxon_order=Caldilineales taxon_class=Caldilineae phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
putative ABC transporter substrate binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16005..16700)
DNA (696bp) protein (232aa)
ABC-type tungstate transport permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-type tungstate transport permease protein id=14626698 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC-type tungstate transport permease protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(16702..17514)
DNA (813bp) protein (271aa)
ABC-type tungstate transport system permease component-like protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC-type tungstate transport system permease component-like protein id=14626697 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC-type tungstate transport system permease component-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17511..17840)
DNA (330bp) protein (110aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14626696 bin=bin7_NC10_sister species=Methanobacterium sp. MB1 genus=Methanobacterium taxon_order=Methanobacteriales taxon_class=Methanobacteria phylum=Euryarchaeota tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17856..18878)
DNA (1023bp) protein (341aa)
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
vitamin-B12 independent methionine synthase; K00549 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase [EC:2.1.1.14] id=14626695 bin=bin7_NC10_sister species=Roseiflexus castenholzii genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
vitamin-B12 independent methionine synthase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_24
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(18878..19588)
DNA (711bp) protein (237aa)
branched-chain amino acid ABC transporter ATP-binding protein; K01996 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
ABC transporter ATP-binding protein I; K01996 branched-chain amino acid transport system ATP-binding protein id=14626694 bin=bin7_NC10_sister species=Afipia birgiae genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein, putative branched-chain amino acid transport
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(19585..20355)
DNA (771bp) protein (257aa)
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter; K01995 branched-chain amino acid transport system ATP-binding protein id=14626693 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ABC transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(20444..21400)
DNA (957bp) protein (319aa)
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01998 branched-chain amino acid transport system permease protein id=14626692 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(21397..22296)
DNA (900bp) protein (300aa)
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
inner-membrane translocator; K01997 branched-chain amino acid transport system permease protein id=14626691 bin=bin7_NC10_sister species=Starkeya novella genus=Starkeya taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
inner-membrane translocator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_28
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(22337..23629)
DNA (1293bp) protein (431aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter substrate-binding protein, branched-chain amino acid transport system; K01999 branched-chain amino acid transport system substrate-binding protein id=14626690 bin=bin7_NC10_sister species=Afipia felis genus=Afipia taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_29
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(23653..25203)
DNA (1551bp) protein (517aa)
AMP-dependent synthetase and ligase; K02182 crotonobetaine/carnitine-CoA ligase [EC:6.2.1.-] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Putative crotonobetaine/carnitine-CoA ligase id=4923973 bin=GWC2_Methylomirabilis_70_16 species=Bacillus azotoformans genus=Bacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
AMP-dependent synthetase and ligase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_17722_30
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(25200..25499)
DNA (300bp) protein (100aa)
hypothetical protein n=1 Tax=Actinoalloteichus spitiensis RepID=UPI000372044E
Enoyl-CoA hydratase/isomerase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Enoyl-CoA hydratase/isomerase
Displaying 30 items

View Taxonomy