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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341

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Displaying 27 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1..501)
DNA (501bp) protein (167aa)
HAD-superfamily hydrolase, subfamily IA, variant 3 Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
HAD-superfamily hydrolase, subfamily IA, variant 3 id=14625638 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
HAD-superfamily hydrolase, subfamily IA, variant 3
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(498..1688)
DNA (1191bp) protein (397aa)
membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
membrane protein id=14625637 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
membrane protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1793..2866)
DNA (1074bp) protein (358aa)
ino1-like myo-inositol-1-phosphate synthase related; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ino1-like myo-inositol-1-phosphate synthase related; K01858 myo-inositol-1-phosphate synthase [EC:5.5.1.4] id=14625636 bin=bin7_NC10_sister species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
ino1-like myo-inositol-1-phosphate synthase related
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2863..3639)
DNA (777bp) protein (259aa)
putative 2-oxoglutarate-Fe(II) oxygenase superfamily Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative 2-oxoglutarate-Fe(II) oxygenase superfamily id=14625635 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative 2-oxoglutarate-Fe(II) oxygenase superfamily
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_5
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3636..4652)
DNA (1017bp) protein (339aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Rokubacteria_69_13_curated
hypothetical protein id=14625634 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4604..4993)
DNA (390bp) protein (130aa)
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase id=14625633 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4993..5880)
DNA (888bp) protein (296aa)
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase id=14625633 bin=bin7_NC10_sister species=Nitrospina gracilis genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
putative bifunctional sugar nucleotidyltransferase/phosphatidyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5877..6626)
DNA (750bp) protein (250aa)
putative sugar nucleotidyltransferase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
putative sugar nucleotidyltransferase id=14625632 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
putative sugar nucleotidyltransferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6623..7810)
DNA (1188bp) protein (396aa)
phosphonopyruvate decarboxylase (EC:4.1.1.82) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
phosphonopyruvate decarboxylase (EC:4.1.1.82) id=14625631 bin=bin7_NC10_sister species=Streptomyces rimosus genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
phosphonopyruvate decarboxylase (EC:4.1.1.82)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(7812..8462)
DNA (651bp) protein (217aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625630 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(8459..9904)
DNA (1446bp) protein (482aa)
outer membrane efflux protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
outer membrane efflux protein id=14625629 bin=bin7_NC10_sister species=Geobacter uraniireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
outer membrane efflux protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(9920..10360)
DNA (441bp) protein (147aa)
Mce-related protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Mce-related protein id=14625628 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
Mce-related protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(10373..11122)
DNA (750bp) protein (250aa)
ABC transporter ATP-binding protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ABC transporter ATP-binding protein id=14625627 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ABC transporter ATP-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_14
CSP1_6_Rokubacteria, Rokubacteria, Bacteria

Not on your lists

comp(11119..11913)
DNA (795bp) protein (265aa)
yrbE; toluene ABC transporter subunit membrane protein id=14625626 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
yrbE; toluene ABC transporter subunit membrane protein Tax=CSP1_6_Rokubacteria
yrbE; toluene ABC transporter subunit membrane protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(11913..13817)
DNA (1905bp) protein (635aa)
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
shc; squalene-hopene cyclase (EC:5.4.99.17); K06045 squalene-hopene cyclase [EC:5.4.99.17 4.2.1.129] id=14625625 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
shc; squalene-hopene cyclase (EC:5.4.99.17)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13953..14837
DNA (885bp) protein (295aa)
hypothetical protein; K08977 putative membrane protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625624 bin=bin7_NC10_sister species=Nitrosospira sp. APG3 genus=Nitrosospira taxon_order=Nitrosomonadales taxon_class=Betaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14834..15856
DNA (1023bp) protein (341aa)
radical SAM protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
radical SAM family Fe-S protein id=14625623 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=Acidobacteriales taxon_class=Acidobacteriia phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
radical SAM protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_18
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15878..16219
DNA (342bp) protein (114aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625621 bin=bin7_NC10_sister species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_19
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

16389..17120
DNA (732bp) protein (244aa)
nucleoside phosphorylase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
nucleoside phosphorylase id=14625620 bin=bin7_NC10_sister species=Thioflavicoccus mobilis genus=Thioflavicoccus taxon_order=Chromatiales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
nucleoside phosphorylase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_20
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17394..17549)
DNA (156bp) protein (52aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_21
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(17559..18014)
DNA (456bp) protein (152aa)
Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_22
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

18147..19016
DNA (870bp) protein (290aa)
squalene/phytoene synthase Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
squalene/phytoene synthase id=14625618 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
squalene/phytoene synthase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_23
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

19013..20032
DNA (1020bp) protein (340aa)
alcohol dehydrogenase (EC:1.1.1.1) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
alcohol dehydrogenase (EC:1.1.1.1) id=14625617 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
alcohol dehydrogenase (EC:1.1.1.1)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_24
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

20029..21135
DNA (1107bp) protein (369aa)
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14) id=14625616 bin=bin7_NC10_sister species=Ktedonobacter racemifer genus=Ktedonobacter taxon_order=Ktedonobacterales taxon_class=Ktedonobacteria phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
Threonine dehydrogenase and related Zn-dependent dehydrogenases (EC:1.1.1.14)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_25
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21132..21743
DNA (612bp) protein (204aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein id=14625615 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_26
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

21883..22884
DNA (1002bp) protein (334aa)
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2) id=14625614 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
ispH; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase (EC:1.17.1.2)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_12341_27
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

23949..24218
DNA (270bp) protein (90aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A7D3_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Rokubacteria_68_19_curated
hypothetical protein
Displaying 27 items

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