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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_1
R_Rokubacteria_69_13, Rokubacteria, Bacteria

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3..224
-----------------
DNA (222bp)
protein (74aa)
hypothetical protein id=14625277 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

241..849
-----------------
DNA (609bp)
protein (203aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase; K03186 3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiX [EC:4.1.1.-] id=14625276 bin=bin7_NC10_sister species=Edwardsiella tarda genus=Edwardsiella taxon_order=Enterobacteriales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
ubiX; 3-polyprenyl-4-hydroxybenzoate carboxy-lyase UbiX (EC:4.1.1.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

842..1606
-----------------
DNA (765bp)
protein (255aa)
family 2 glycosyl transferase id=14625275 bin=bin7_NC10_sister species=Nitrospina sp. SCGC AAA288-L16 genus=Nitrospina taxon_order=Nitrospinales taxon_class=Nitrospinia phylum=Nitrospinae tax=bin7_NC10_sister organism_group=NC10
family 2 glycosyl transferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

1603..2574
-----------------
DNA (972bp)
protein (324aa)
oxidoreductase-like protein id=14625274 bin=bin7_NC10_sister species=Pedosphaera parvula genus=Pedosphaera taxon_order=Verrucomicrobiales taxon_class=Verrucomicrobiae phylum=Verrucomicrobia tax=bin7_NC10_sister organism_group=NC10
oxidoreductase-like protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(2720..3790)
-----------------
DNA (1071bp)
protein (357aa)
response regulator receiver modulated metal dependent phosphohydrolase id=14625272 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
cyaB4; response regulator/adenylate cyclase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_6
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

comp(3783..4160)
-----------------
DNA (378bp)
protein (126aa)
two-component response regulator id=14625271 bin=bin7_NC10_sister species=Thermodesulfovibrio yellowstonii genus=Thermodesulfovibrio taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=bin7_NC10_sister organism_group=NC10
response regulator receiver protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_7
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(4160..6913)
-----------------
DNA (2754bp)
protein (918aa)
periplasmic sensor hybrid histidine kinase id=14625270 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Cyanobacteria tax=bin7_NC10_sister organism_group=NC10
signal transduction histidine kinase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(6918..7139)
-----------------
DNA (222bp)
protein (74aa)
id=14625269 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_trna_2
unknown

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comp(7315..7398)
-----------------
DNA (84bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

7447..7905
-----------------
DNA (459bp)
protein (153aa)
smpB; ssrA-binding protein; K03664 SsrA-binding protein id=14625268 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
smpB; SsrA-binding protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_10
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8375..9877
-----------------
DNA (1503bp)
protein (501aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28) id=14625267 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9874..10611
-----------------
DNA (738bp)
protein (246aa)
rph; ribonuclease PH (EC:2.7.7.56); K00989 ribonuclease PH [EC:2.7.7.56] id=14625266 bin=bin7_NC10_sister species=Brevibacillus panacihumi genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
rph; ribonuclease PH (EC:2.7.7.56)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists


10586..11206
-----------------
DNA (621bp)
protein (207aa)
ASCG--Non-canonical--purine--NTP--pyrophosphatase
nucleoside-triphosphatase rdgB (EC:3.6.1.15); K02428 dITP/XTP pyrophosphatase [EC:3.6.1.19] id=14625265 bin=bin7_NC10_sister species=Desulfotomaculum kuznetsovii genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
nucleoside-triphosphatase rdgB (EC:3.6.1.15)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_trna_1
unknown

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11229..11302
-----------------
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_44299_13
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

11311..11592
-----------------
DNA (282bp)
protein (94aa)
id=14625264 bin=bin7_NC10_sister tax=bin7_NC10_sister organism_group=NC10
Displaying 15 items

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