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RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_1
R_Rokubacteria_68_19, Rokubacteria, Bacteria

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comp(658..996)
-----------------
DNA (339bp)
protein (113aa)
nitrogen regulatory protein PII; K04751 nitrogen regulatory protein P-II 1 id=14625785 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=bin7_NC10_sister organism_group=NC10
nitrogen regulatory protein PII
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_2
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1125..1493)
-----------------
DNA (369bp)
protein (123aa)
putative two-component system response regulator; K07669 two-component system, OmpR family, response regulator MprA id=14625784 bin=bin7_NC10_sister species=Kitasatospora setae genus=Kitasatospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
transcriptional regulator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_3
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(1745..3106)
-----------------
DNA (1362bp)
protein (454aa)
two component, sigma54 specific, transcriptional regulator, Fis family; K07714 two-component system, NtrC family, response regulator AtoC id=14625783 bin=bin7_NC10_sister species=Ammonifex degensii genus=Ammonifex taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=bin7_NC10_sister organism_group=NC10
sigma-54-dependent transcriptional response regulator
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_4
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(3103..4575)
-----------------
DNA (1473bp)
protein (491aa)
multi-sensor signal transduction histidine kinase id=14625782 bin=bin7_NC10_sister species=Herpetosiphon aurantiacus genus=Herpetosiphon taxon_order=Herpetosiphonales taxon_class=Chloroflexi phylum=Chloroflexi tax=bin7_NC10_sister organism_group=NC10
hypothetical protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_5
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

comp(5331..6581)
-----------------
DNA (1251bp)
protein (417aa)
Major facilitator superfamily MFS_1 id=3763004 bin=GWA2_Methylomirabilis_73_35 species=Dethiobacter alkaliphilus genus=Dethiobacter taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWA2_Methylomirabilis_73_35 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
major facilitator transporter
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_6
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

6684..7646
-----------------
DNA (963bp)
protein (321aa)
Coenzyme f420-dependent n5,n10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases id=4348872 bin=GWF2_Methylomirabilis_70_14 species=uncultured Chloroflexi bacterium HF0200_06I16 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
luciferase family protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_7
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

7910..8161
-----------------
DNA (252bp)
protein (84aa)
Pyridoxamine 5'-phosphate oxidase-related, FMN-binding id=4348874 bin=GWF2_Methylomirabilis_70_14 species=unknown genus=Roseiflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
ppox class F420-dependent protein
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_8
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

8158..9345
-----------------
DNA (1188bp)
protein (396aa)
FO synthase subunit 1 id=2615064 bin=GWC2_Methylomirabilis_70_24 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
cofG; FO synthase subunit 1
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_9
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

9353..10597
-----------------
DNA (1245bp)
protein (415aa)
cofH; 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase (EC:2.5.1.-)
FO synthase subunit 2 id=4828264 bin=GWC2_Methylomirabilis_70_16 species=Thermomicrobium roseum genus=Thermomicrobium taxon_order=Thermomicrobiales taxon_class=Thermomicrobia phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_10
R_Rokubacteria_69_13, Rokubacteria, Bacteria

Not on your lists

10682..10972
-----------------
DNA (291bp)
protein (97aa)
Transcriptional dual regulator HU-beta id=4828265 bin=GWC2_Methylomirabilis_70_16 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
hupB; transcriptional dual regulator HU-beta
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_11
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

11076..11582
-----------------
DNA (507bp)
protein (169aa)
id=4828293 bin=GWC2_Methylomirabilis_70_16 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_12
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12142..12378
-----------------
DNA (237bp)
protein (79aa)
2-phospho-L-lactate transferase id=4348880 bin=GWF2_Methylomirabilis_70_14 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWF2_Methylomirabilis_70_14 organism_group=NC10 organism_desc=Sibling clade to Methylomirabilis
LPPG:FO 2-phospho-L-lactate transferase
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_13
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

12375..13049
-----------------
DNA (675bp)
protein (225aa)
2-phospho-L-lactate guanylyltransferase id=2615049 bin=GWC2_Methylomirabilis_70_24 species=uncultured Acidobacteria bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=GWC2_Methylomirabilis_70_24 organism_group=NC10 organism_desc=Good
2-phospho-L-lactate guanylyltransferase CofC
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_14
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13093..13881
-----------------
DNA (789bp)
protein (263aa)
coenzyme F420-0 gamma-glutamyl ligase; K12234 coenzyme F420-0:L-glutamate ligase / coenzyme F420-1:gamma-L-glutamate ligase [EC:6.3.2.31 6.3.2.34] id=14628085 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Acidobacteria tax=bin7_NC10_sister organism_group=NC10
coenzyme F420-0 gamma-glutamyl ligase (EC:6.3.2.-)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_15
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

13901..14020
-----------------
DNA (120bp)
protein (40aa)
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_16
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

14103..15446
-----------------
DNA (1344bp)
protein (448aa)
M16B family peptidase (EC:3.4.24.-)
M16 family peptidase id=14628084 bin=bin7_NC10_sister species=Myxococcus fulvus genus=Myxococcus taxon_order=Myxococcales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
RIFCSPLOWO2_02_FULL_bin7_NC10_sister_68_19_rifcsplowo2_02_scaffold_35218_17
R_Rokubacteria_68_19, Rokubacteria, Bacteria

Not on your lists

15446..16114
-----------------
DNA (669bp)
protein (223aa)
processing peptidase (EC:3.4.24.64) id=14628083 bin=bin7_NC10_sister species=unknown genus=unknown taxon_order=unknown taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin7_NC10_sister organism_group=NC10
processing peptidase (EC:3.4.24.64)
Displaying 17 items

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