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RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

146..622
-----------------
DNA (477bp)
protein (159aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET50_AMOA5
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_2
unknown

Not on your lists

comp(1050..1310)
-----------------
DNA (261bp)
protein (87aa)

This feature has no annotations

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

1638..2450
-----------------
DNA (813bp)
protein (271aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=17732 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
dihydrodipicolinate reductase (EC:1.3.1.26)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(2447..3580)
-----------------
DNA (1134bp)
protein (378aa)
High-affinity branched-chain amino acid ABC transporter (Substrate-binding protein) id=2315337 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
livK; branched-chain amino acid transport system substrate-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3570..4736)
-----------------
DNA (1167bp)
protein (389aa)
High-affinity branched-chain amino acid ABC transporter (Substrate-binding protein) id=4128224 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
periplasmic amino acid-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(4729..5517)
-----------------
DNA (789bp)
protein (263aa)
Phosphate binding protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5W7_DESAP
phosphate binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

5670..7409
-----------------
DNA (1740bp)
protein (580aa)
DNA repair protein RecN n=1 Tax=Melissococcus plutonius (strain ATCC 35311 / CIP 104052 / LMG 20360 / NCIMB 702443) RepID=F3Y9Q0_MELPT
DNA repair protein RecN
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7479..7655)
-----------------
DNA (177bp)
protein (59aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

7760..8434
-----------------
DNA (675bp)
protein (225aa)
Adenylate kinase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8R1_METEZ
adenylate kinase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

8425..9210
-----------------
DNA (786bp)
protein (262aa)
Methionine aminopeptidase id=4733410 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
methionine aminopeptidase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

9228..9476
-----------------
DNA (249bp)
protein (83aa)
Translation initiation factor IF-1 n=4 Tax=Veillonellaceae RepID=C9KPC9_9FIRM id=19979 bin=ACD20 species=unknown genus=unknown taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
infA; translation initiation factor IF-1
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

9489..9602
-----------------
DNA (114bp)
protein (38aa)
50S ribosomal protein L36 n=1 Tax=Clostridium sp. CAG:302 RepID=R6M7Z3_9CLOT
50S ribosomal protein L36
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


9774..10160
-----------------
DNA (387bp)
protein (129aa)
BSCG--ribosomal--protein--S13
ASCG--Ribosomal--protein--S13
30S ribosomal protein S13 n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WTU8_ALIAD
30S ribosomal protein S13
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


10167..10541
-----------------
DNA (375bp)
protein (125aa)
BSCG--ribosomal--protein--S11
30S ribosomal protein S11 n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W167_9CYAN
ribosomal protein S11
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

10507..11556
-----------------
DNA (1050bp)
protein (350aa)
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=152750 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


11556..11909
-----------------
DNA (354bp)
protein (118aa)
BSCG--ribosomal--protein--L17
50S ribosomal protein L17 n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XZU3_STAC7
LSU ribosomal protein L17P
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

11964..12902
-----------------
DNA (939bp)
protein (313aa)
Dihydroorotate dehydrogenase n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CED8_9ACTN
dihydroorotate dehydrogenase 1B
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_18
unknown

Not on your lists

comp(12821..13006)
-----------------
DNA (186bp)
protein (62aa)

This feature has no annotations

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

13120..14109
-----------------
DNA (990bp)
protein (330aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA027-L15 RepID=UPI000378FF48
dnaJ; chaperone protein DnaJ
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(14106..15188)
-----------------
DNA (1083bp)
protein (361aa)
Agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RPM4_FIBSS
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(15178..16041)
-----------------
DNA (864bp)
protein (288aa)
Hydrolase, carbon-nitrogen family n=2 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=D9S563_FIBSS
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16108..16623)
-----------------
DNA (516bp)
protein (172aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16762..17691)
-----------------
DNA (930bp)
protein (310aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(17814..18806)
-----------------
DNA (993bp)
protein (331aa)
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46SQ6_CUPPJ
ATPase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(18854..19222)
-----------------
DNA (369bp)
protein (123aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(19313..20914)
-----------------
DNA (1602bp)
protein (534aa)
Sulfate transporter n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q1R5_NITSB
sulfate transporter
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21049..21237
-----------------
DNA (189bp)
protein (63aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21240..22685
-----------------
DNA (1446bp)
protein (482aa)
Uncharacterized protein n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q119Z7_TRIEI
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_29
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(22654..24021)
-----------------
DNA (1368bp)
protein (456aa)
Uncharacterized protein n=2 Tax=root RepID=R6B6J4_9CLOT
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_30
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

24145..26640
-----------------
DNA (2496bp)
protein (832aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKI0_CLOPE
hypothetical protein
Displaying items 1-30 of 57 in total

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