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RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409

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Displaying items 1-30 of 57 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_1
Candidatus Amoebophilus asiaticus, Candidatus Amoebophilus, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

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146..622
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Amoebophilus asiaticus (strain 5a2) RepID=B3ET50_AMOA5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACE06402.1}; TaxID=452471 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Amoebophilaceae; Candidatus Amoebophilus.;" source="Amoebophilus asiatic
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_2
unknown

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comp(1050..1310)
DNA (261bp) protein (87aa)

This feature has no annotations

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

1638..2450
DNA (813bp) protein (271aa)
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
dihydrodipicolinate reductase (EC:1.3.1.26); K00215 dihydrodipicolinate reductase [EC:1.3.1.26] id=17732 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
dihydrodipicolinate reductase (EC:1.3.1.26)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(2447..3580)
DNA (1134bp) protein (378aa)
livK; branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
High-affinity branched-chain amino acid ABC transporter (Substrate-binding protein) id=2315337 bin=GWB2_Nitrospirae_rel_47_37 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Nitrospirae_rel_47_37 organism_group=Nitrospirae organism_desc=Good + (but may not be Nitrospirae phylum)
livK; branched-chain amino acid transport system substrate-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3570..4736)
DNA (1167bp) protein (389aa)
periplasmic amino acid-binding protein; K01999 branched-chain amino acid transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
High-affinity branched-chain amino acid ABC transporter (Substrate-binding protein) id=4128224 bin=GWF2_Nitrospirae_44_13 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_Nitrospirae_44_13 organism_group=Nitrospirae
periplasmic amino acid-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(4729..5517)
DNA (789bp) protein (263aa)
Phosphate binding protein n=1 Tax=Desulforudis audaxviator (strain MP104C) RepID=B1I5W7_DESAP
phosphate binding protein; K02040 phosphate transport system substrate-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
phosphate binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

5670..7409
DNA (1740bp) protein (580aa)
DNA repair protein RecN n=1 Tax=Melissococcus plutonius (strain ATCC 35311 / CIP 104052 / LMG 20360 / NCIMB 702443) RepID=F3Y9Q0_MELPT
DNA repair protein RecN; K03631 DNA repair protein RecN (Recombination protein N) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
DNA repair protein RecN
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7479..7655)
DNA (177bp) protein (59aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

7760..8434
DNA (675bp) protein (225aa)
adenylate kinase; K00939 adenylate kinase [EC:2.7.4.3] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Adenylate kinase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E8R1_METEZ
adenylate kinase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

8425..9210
DNA (786bp) protein (262aa)
methionine aminopeptidase; K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Methionine aminopeptidase id=4733410 bin=GWA2_Tenericute_38_26 species=Acholeplasma laidlawii genus=Acholeplasma taxon_order=Acholeplasmatales taxon_class=Mollicutes phylum=Tenericutes tax=GWA2_Tenericute_38_26 organism_group=Tenericutes organism_desc=Closest isolate is 1.5 Mb genome
methionine aminopeptidase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

9228..9476
DNA (249bp) protein (83aa)
Translation initiation factor IF-1 n=4 Tax=Veillonellaceae RepID=C9KPC9_9FIRM id=19979 bin=ACD20 species=unknown genus=unknown taxon_order=Selenomonadales taxon_class=Negativicutes phylum=Firmicutes tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
infA; translation initiation factor IF-1; K02518 translation initiation factor IF-1 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
infA; translation initiation factor IF-1
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

9489..9602
DNA (114bp) protein (38aa)
50S ribosomal protein L36 n=1 Tax=Clostridium sp. CAG:302 RepID=R6M7Z3_9CLOT
RpmJ; ribosomal protein L36; K02919 large subunit ribosomal protein L36 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
50S ribosomal protein L36
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


9774..10160
DNA (387bp) protein (129aa)
30S ribosomal protein S13 n=1 Tax=Alicyclobacillus acidocaldarius subsp. acidocaldarius (strain ATCC 27009 / DSM 446 / 104-1A) RepID=C8WTU8_ALIAD
30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
30S ribosomal protein S13
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


10167..10541
DNA (375bp) protein (125aa)
30S ribosomal protein S11 n=1 Tax=Leptolyngbya sp. Heron Island J RepID=U9W167_9CYAN
30S ribosomal protein S11 Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ribosomal protein S11
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

10507..11556
DNA (1050bp) protein (350aa)
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
rpoA; DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] id=152750 bin=MEL_A1 species=MEL_A1 genus=MEL_A1 taxon_order=MEL_A1 taxon_class=MEL_A1 phylum=Melainabacteria tax=MEL_A1 organism_group=Melainabacteria
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


11556..11909
DNA (354bp) protein (118aa)
50S ribosomal protein L17 n=1 Tax=Stanieria cyanosphaera (strain ATCC 29371 / PCC 7437) RepID=K9XZU3_STAC7
LSU ribosomal protein L17P Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
LSU ribosomal protein L17P
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

11964..12902
DNA (939bp) protein (313aa)
dihydroorotate dehydrogenase 1B; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Dihydroorotate dehydrogenase n=1 Tax=Cryptobacterium sp. CAG:338 RepID=R7CED8_9ACTN
dihydroorotate dehydrogenase 1B
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_18
unknown

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comp(12821..13006)
DNA (186bp) protein (62aa)

This feature has no annotations

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

13120..14109
DNA (990bp) protein (330aa)
hypothetical protein n=1 Tax=alpha proteobacterium SCGC AAA027-L15 RepID=UPI000378FF48
dnaJ; chaperone protein DnaJ; K03686 molecular chaperone DnaJ Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
dnaJ; chaperone protein DnaJ
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(14106..15188)
DNA (1083bp) protein (361aa)
Agmatine deiminase (EC:3.5.3.12); K10536 agmatine deiminase [EC:3.5.3.12] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Agmatine deiminase (EC:3.5.3.12)
Agmatine deiminase n=1 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=C9RPM4_FIBSS
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(15178..16041)
DNA (864bp) protein (288aa)
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase; K12251 N-carbamoylputrescine amidase [EC:3.5.1.53] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Hydrolase, carbon-nitrogen family n=2 Tax=Fibrobacter succinogenes (strain ATCC 19169 / S85) RepID=D9S563_FIBSS
nitrilase/cyanide hydratase and apolipoprotein N-acyltransferase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16108..16623)
DNA (516bp) protein (172aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16762..17691)
DNA (930bp) protein (310aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(17814..18806)
DNA (993bp) protein (331aa)
ATPase; K03924 MoxR-like ATPase [EC:3.6.3.-] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ATPase associated with various cellular activities, AAA_3 n=1 Tax=Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) RepID=Q46SQ6_CUPPJ
ATPase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(18854..19222)
DNA (369bp) protein (123aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(19313..20914)
DNA (1602bp) protein (534aa)
Sulfate transporter n=1 Tax=Nitratiruptor sp. (strain SB155-2) RepID=A6Q1R5_NITSB
sulfate transporter; K03321 sulfate permease, SulP family Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
sulfate transporter
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21049..21237
DNA (189bp) protein (63aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21240..22685
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Trichodesmium erythraeum (strain IMS101) RepID=Q119Z7_TRIEI
hypothetical protein; K06860 uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_29
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(22654..24021)
DNA (1368bp) protein (456aa)
Uncharacterized protein n=2 Tax=root RepID=R6B6J4_9CLOT
Uncharacterized protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_409_30
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

24145..26640
DNA (2496bp) protein (832aa)
hypothetical protein; K15524 mannosylglycerate hydrolase [EC:3.2.1.170] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Uncharacterized protein n=1 Tax=Clostridium perfringens (strain 13 / Type A) RepID=Q8XKI0_CLOPE
hypothetical protein
Displaying items 1-30 of 57 in total

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