ggKbase home page

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_1
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

2..1168
-----------------
DNA (1167bp)
protein (389aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CJ87_9BACT
putative ATPase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(1201..2304)
-----------------
DNA (1104bp)
protein (368aa)
histidinol-phosphate aminotransferase (EC:2.6.1.9)
Histidinol-phosphate aminotransferase n=1 Tax=Methanosarcina mazei (strain ATCC BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88) RepID=HIS8_METMA
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

2315..2884
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein id=20044 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
SNARE associated Golgi family protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(2881..3378)
-----------------
DNA (498bp)
protein (166aa)
UPF0234 protein A966_12036 n=1 Tax=Brachyspira hampsonii 30446 RepID=L0WZW0_9SPIR
nucleotide-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3389..5869)
-----------------
DNA (2481bp)
protein (827aa)
penicillin acylase II (EC:3.5.1.11)
beta-lactam antibiotic acylase n=1 Tax=Bacillus oceanisediminis RepID=UPI000307C037
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

5906..7381
-----------------
DNA (1476bp)
protein (492aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EBJ7_9BACT
pcnB2; poly A polymerase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7378..8745)
-----------------
DNA (1368bp)
protein (456aa)
C-terminal processing peptidase subfamily id=4465041 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
C-terminal processing peptidase-2
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(8872..9954)
-----------------
DNA (1083bp)
protein (361aa)
Probable dual-specificity RNA methyltransferase RlmN n=1 Tax=Clostridium sp. CAG:813 RepID=R7MCD3_9CLOT
rlmN; ribosomal RNA large subunit methyltransferase RlmN
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

10050..13724
-----------------
DNA (3675bp)
protein (1225aa)
Kelch repeat protein n=1 Tax=Leptospira noguchii str. 2007001578 RepID=M6I2B0_9LEPT
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(13759..14337)
-----------------
DNA (579bp)
protein (193aa)
hypothetical protein n=1 Tax=Calescamantes bacterium SCGC AAA471-M6 RepID=UPI0003B67D91
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(14413..15126)
-----------------
DNA (714bp)
protein (238aa)
Enhancing lycopene biosynthesis protein 2 n=1 Tax=Sulfurihydrogenibium yellowstonense SS-5 RepID=C4FJG2_9AQUI
isoprenoid biosynthesis protein with amidotransferase-like domain
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

15427..15915
-----------------
DNA (489bp)
protein (163aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

15983..16858
-----------------
DNA (876bp)
protein (292aa)
RNA polymerase sigma factor n=1 Tax=Fusobacterium sp. CAG:815 RepID=R7LX02_9FUSO
RNA polymerase sigma 28 subunit FliA/WhiG
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

16934..18040
-----------------
DNA (1107bp)
protein (369aa)
DNA protecting protein DprA n=3 Tax=Clostridium botulinum RepID=C3L0D6_CLOB6
dprA; DNA protecting protein DprA
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(17991..19598)
-----------------
DNA (1608bp)
protein (536aa)
hypothetical protein n=1 Tax=Orenia marismortui RepID=UPI0003731307
2-isopropylmalate synthase/homocitrate synthase family protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_trna_1
unknown

Not on your lists

19700..19778
-----------------
DNA (79bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

19974..20396
-----------------
DNA (423bp)
protein (141aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

20433..21239
-----------------
DNA (807bp)
protein (269aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_18
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21351..21896
-----------------
DNA (546bp)
protein (182aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


22017..22238
-----------------
DNA (222bp)
protein (74aa)
BSCG--ribosomal--protein--S18
30S ribosomal protein S18 n=1 Tax=Pseudanabaena sp. PCC 7367 RepID=K9SPB5_9CYAN
30S ribosomal protein S18
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

22252..22521
-----------------
DNA (270bp)
protein (90aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(22511..23017)
-----------------
DNA (507bp)
protein (169aa)
Phosphohistidine phosphatase, SixA n=1 Tax=Methanoregula boonei (strain 6A8) RepID=A7I516_METB6
phosphohistidine phosphatase, SixA
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(23031..23405)
-----------------
DNA (375bp)
protein (125aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(23639..25783)
-----------------
DNA (2145bp)
protein (715aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2D933_9BACT
lytic transglycosylase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

25855..28734
-----------------
DNA (2880bp)
protein (960aa)
gwc:GWCH70_2991 uvrA; excinuclease ABC subunit A; K03701 excinuclease ABC subunit A id=18714 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Excinuclease ABC subunit A
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

28976..29584
-----------------
DNA (609bp)
protein (203aa)
superoxide dismutase n=1 Tax=unclassified candidate division EM 19 RepID=UPI0003B535FC
manganese and iron superoxide dismutase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

29654..30133
-----------------
DNA (480bp)
protein (160aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

30152..30358
-----------------
DNA (207bp)
protein (69aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(30346..31488)
-----------------
DNA (1143bp)
protein (381aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2DCY9_9BACT
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_1510_29
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(31790..33811)
-----------------
DNA (2022bp)
protein (674aa)
UvrABC system protein B n=1 Tax=Clostridium sp. CAG:306 RepID=R6QIB1_9CLOT
uvrB; excinuclease ABC subunit B
Displaying items 1-30 of 42 in total

View Taxonomy