ggKbase home page

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358

Search features with annotation key words

Displaying items 1-30 of 100 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_1
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(1..3585)
-----------------
DNA (3585bp)
protein (1195aa)
Uncharacterized protein n=1 Tax=Stigmatella aurantiaca (strain DW4/3-1) RepID=Q09DX3_STIAD
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

3829..4686
-----------------
DNA (858bp)
protein (286aa)
Uncharacterized protein n=1 Tax=Aquifex aeolicus (strain VF5) RepID=O66654_AQUAE
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

4847..6244
-----------------
DNA (1398bp)
protein (466aa)
hypothetical protein n=1 Tax=Leptolyngbya boryana RepID=UPI000374A81F
Cytochrome c biogenesis protein ccs1
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

6247..7155
-----------------
DNA (909bp)
protein (303aa)
Cytochrome c biogenesis protein CcsA n=2 Tax=Cyanidiaceae RepID=CCSA_GALSU
cytochrome c-type biogenesis protein CcsB
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7166..7363)
-----------------
DNA (198bp)
protein (66aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7440..8360)
-----------------
DNA (921bp)
protein (307aa)
putative glycosyltransferase (EC:2.4.-.-)
Putative glycosyltransferase n=1 Tax=Anaerolinea thermophila (strain DSM 14523 / JCM 11388 / NBRC 100420 / UNI-1) RepID=E8MXG8_ANATU
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(8383..8715)
-----------------
DNA (333bp)
protein (111aa)
Nucleotidyltransferase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WQQ7_METH6
nucleotidyltransferase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(8712..9002)
-----------------
DNA (291bp)
protein (97aa)
DNA polymerase beta domain protein region id=3112943 bin=GWC2_Methylomirabilis_70_16 species=Chloroflexus aggregans genus=Chloroflexus taxon_order=Chloroflexales taxon_class=Chloroflexi phylum=Chloroflexi tax=GWC2_Methylomirabilis_70_16 organism_group=NC10
nucleotidyltransferase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(9030..10487)
-----------------
DNA (1458bp)
protein (486aa)
Phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucomutase/phosphomannomutase id=4659420 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

10744..11541
-----------------
DNA (798bp)
protein (266aa)
Two component transcriptional regulator, winged helix family n=1 Tax=Nostoc sp. PCC 7107 RepID=K9Q940_9NOSO
winged helix family two component transcriptional regulator
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(11533..12015)
-----------------
DNA (483bp)
protein (161aa)
hypothetical protein n=1 Tax=Balneola vulgaris RepID=UPI000370EDA1
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_trna_1
unknown

Not on your lists

12045..12118
-----------------
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(12151..13884)
-----------------
DNA (1734bp)
protein (578aa)
Gll3362 protein n=1 Tax=Gloeobacter violaceus (strain PCC 7421) RepID=Q7NG12_GLOVI
electron transfer flavoprotein-ubiquinone oxidoreductase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(13877..14998)
-----------------
DNA (1122bp)
protein (374aa)
Electron transfer flavoprotein, alpha subunit/FixB family protein n=1 Tax=Synechococcus sp. (strain JA-2-3B'a(2-13)) RepID=Q2JK99_SYNJB
electron transfer flavoprotein subunit alpha/FixB family protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(14995..15828)
-----------------
DNA (834bp)
protein (278aa)
Electron transfer flavoprotein subunit beta n=1 Tax=Gloeobacter kilaueensis JS1 RepID=U5QDJ2_9CYAN
fixA; electron transfer flavoprotein subunit beta
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

16017..17396
-----------------
DNA (1380bp)
protein (460aa)
Tryptophanase id=1801952 bin=GWB2_Elusimicrobia_63_16 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
tnaA; tryptophanase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

17755..18696
-----------------
DNA (942bp)
protein (314aa)
MucD; K01362 [EC:3.4.21.-] id=5044637 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
periplasmic serine protease, Do/DeqQ family
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

18746..19513
-----------------
DNA (768bp)
protein (256aa)
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Caloramator australicus RC3 RepID=I7J6C5_9CLOT
16S ribosomal RNA methyltransferase RsmE
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_18
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(19525..20346)
-----------------
DNA (822bp)
protein (274aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

20670..21179
-----------------
DNA (510bp)
protein (170aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

21163..21786
-----------------
DNA (624bp)
protein (208aa)
nth; endonuclease III protein; K10773 endonuclease III [EC:4.2.99.18] id=5084220 bin=GWA2_OP11_43_14 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWA2_OP11_43_14 organism_group=OP11 (Microgenomates) organism_desc=GWA2_OP11_2
nth; endoIII-related endonuclease
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(21757..22527)
-----------------
DNA (771bp)
protein (257aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(22517..23560)
-----------------
DNA (1044bp)
protein (348aa)
phosphoribosylaminoimidazole synthetase (EC:6.3.3.1)
Phosphoribosylformylglycinamidine cyclo-ligase id=4495916 bin=GWC2_Deltaproteobacteria_42_51 species=Geobacter sp. genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_42_51 organism_group=Deltaproteobacteria
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

23579..24178
-----------------
DNA (600bp)
protein (200aa)
Glycerol-3-phosphate acyltransferase n=1 Tax=uncultured bacterium RepID=K2D8W5_9BACT
acyl-phosphate glycerol 3-phosphate acyltransferase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(24182..24610)
-----------------
DNA (429bp)
protein (143aa)
Single-stranded DNA-binding protein n=1 Tax=Chloracidobacterium thermophilum (strain B) RepID=G2LEN2_CHLTF
ssDNA-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


comp(24607..24918)
-----------------
DNA (312bp)
protein (104aa)
BSCG--ribosomal--protein--S6
30S ribosomal protein S6 n=1 Tax=Clostridium sp. D5 RepID=F0YW23_9CLOT
SSU ribosomal protein S6P
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(24950..25417)
-----------------
DNA (468bp)
protein (156aa)
Uncharacterized protein family UPF0079, ATPase n=1 Tax=Cellulosilyticum lentocellum (strain ATCC 49066 / DSM 5427 / NCIMB 11756 / RHM5) RepID=F2JKU2_CELLD
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(25371..25949)
-----------------
DNA (579bp)
protein (193aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2E448_9BACT
Lipoprotein LpqB, GerMN domain-containing protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(25959..26882)
-----------------
DNA (924bp)
protein (308aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_358_29
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(26879..27781)
-----------------
DNA (903bp)
protein (301aa)
Carbohydrate ABC transporter membrane protein 1, CUT1 family n=1 Tax=Mahella australiensis (strain DSM 15567 / CIP 107919 / 50-1 BON) RepID=F3ZY15_MAHA5
CUT1 family carbohydrate ABC transporter membrane protein 1
Displaying items 1-30 of 100 in total

View Taxonomy