ggKbase home page

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161

Search features with annotation key words

Displaying items 1-30 of 113 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_1
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(55..1614)
-----------------
DNA (1560bp)
protein (520aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_trna_2
unknown

Not on your lists

comp(1714..1787)
-----------------
DNA (74bp)
transferRNA
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

1894..2124
-----------------
DNA (231bp)
protein (77aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(2131..3507)
-----------------
DNA (1377bp)
protein (459aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(3641..4462)
-----------------
DNA (822bp)
protein (274aa)
Radical SAM domain protein n=1 Tax=Cyanothece sp. (strain PCC 7424) RepID=B7KJ72_CYAP7
radical SAM protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

4501..5280
-----------------
DNA (780bp)
protein (260aa)
periplasmic binding protein; K02016 iron complex transport system substrate-binding protein id=5048739 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Fe3+-hydroxamate ABC transporter substrate-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

5287..6972
-----------------
DNA (1686bp)
protein (562aa)
RNA-metabolising metallo-beta-lactamase n=1 Tax=Thermincola potens (strain JR) RepID=D5XF38_THEPJ
RNA-metabolising metallo-beta-lactamase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

6945..7460
-----------------
DNA (516bp)
protein (172aa)
tRNA/rRNA methyltransferase n=1 Tax=Microbacterium sp. TS-1 RepID=U2YM54_9MICO
rRNA methylase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

7457..7891
-----------------
DNA (435bp)
protein (145aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(7912..8526)
-----------------
DNA (615bp)
protein (205aa)
ATP-dependent protease La domain protein n=1 Tax=Candidatus Chloracidobacterium thermophilum RepID=A8DJJ1_9BACT
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(8606..9292)
-----------------
DNA (687bp)
protein (229aa)
Cytidylate kinase n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NF37_9LACT
cmk; cytidylate kinase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(9279..10130)
-----------------
DNA (852bp)
protein (284aa)
Pantothenate synthetase n=1 Tax=uncultured bacterium RepID=K2E2F9_9BACT
cytidylate kinase/pantoate--beta-alanine ligase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

10166..13087
-----------------
DNA (2922bp)
protein (974aa)
Protein translocase subunit SecA n=1 Tax=Thermus oshimai JL-2 RepID=K7QV73_THEOS
preprotein translocase, SecA subunit
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(13060..14427)
-----------------
DNA (1368bp)
protein (456aa)
Acetyl-CoA carboxylase, biotin carboxylase id=4162808 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
acetyl-CoA carboxylase biotin carboxylase subunit
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


comp(14533..14913)
-----------------
DNA (381bp)
protein (127aa)
50S ribosomal protein L7/L12 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TRX3_9BRAD
LSU ribosomal protein L7/L12
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists


comp(14934..15455)
-----------------
DNA (522bp)
protein (174aa)
BSCG--ribosomal--protein--L10
50S ribosomal protein L10 id=4306063 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
rplJ; 50S ribosomal protein L10
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(15734..16027)
-----------------
DNA (294bp)
protein (98aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16040..16396)
-----------------
DNA (357bp)
protein (119aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_18
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16488..16751)
-----------------
DNA (264bp)
protein (88aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(16976..17275)
-----------------
DNA (300bp)
protein (100aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(17311..18507)
-----------------
DNA (1197bp)
protein (399aa)
N-acetylglucosamine-6-phosphate deacetylase (EC:3.5.1.25)
hypothetical protein n=1 Tax=Geminocystis herdmanii RepID=UPI0003499E1B
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

18669..18947
-----------------
DNA (279bp)
protein (93aa)
DNA-binding protein HU n=1 Tax=Acinetobacter sp. CAG:196 RepID=R5SBT7_9GAMM
nucleoid protein Hbs
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(18983..19843)
-----------------
DNA (861bp)
protein (287aa)
uroporphyrin-III C/tetrapyrrole (corrin/porphyrin) methyltransferase; K07056 id=19144 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(19861..20637)
-----------------
DNA (777bp)
protein (259aa)
hypothetical protein n=1 Tax=Methanomassiliicoccus luminyensis RepID=UPI000360F1C4
ABC transporter-like protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(20638..21396)
-----------------
DNA (759bp)
protein (253aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Thermincola potens (strain JR) RepID=D5XFA7_THEPJ
binding-protein-dependent transport system inner membrane protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(21377..22351)
-----------------
DNA (975bp)
protein (325aa)
Aliphatic sulfonates family ABC transporter, periplasmic ligand-binding protein n=1 Tax=Deinococcus maricopensis (strain DSM 21211 / LMG 22137 / NRRL B-23946 / LB-34) RepID=E8U941_DEIML
aliphatic sulfonates family ABC transporter periplasmic ligand-binding protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

22571..22669
-----------------
DNA (99bp)
protein (33aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

22756..22908
-----------------
DNA (153bp)
protein (51aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

22901..23032
-----------------
DNA (132bp)
protein (44aa)
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_161_29
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

23025..23225
-----------------
DNA (201bp)
protein (67aa)
Displaying items 1-30 of 113 in total

View Taxonomy