ggKbase home page

RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166

Search features with annotation key words

Displaying items 1-30 of 161 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_1
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(209..1639)
DNA (1431bp) protein (477aa)
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
atpD; F0F1 ATP synthase subunit beta (EC:3.6.3.14)
ATP synthase subunit beta id=2727004 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_2
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(1716..2357)
DNA (642bp) protein (214aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_3
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(2383..3381)
DNA (999bp) protein (333aa)
metallophosphoesterase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
metallophosphoesterase id=17690 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_4
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

3403..6138
DNA (2736bp) protein (912aa)
proteinase; K07263 zinc protease [EC:3.4.24.-] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EA79_9BACT
proteinase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_5
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(6142..8928)
DNA (2787bp) protein (929aa)
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5); K01870 isoleucyl-tRNA synthetase [EC:6.1.1.5] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
ileS; isoleucyl-tRNA synthetase (EC:6.1.1.5)
Isoleucine--tRNA ligase id=4170461 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_6
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(8932..9801)
DNA (870bp) protein (290aa)
Acetylglutamate kinase n=1 Tax=Richelia intracellularis HH01 RepID=M1X001_9NOST
acetylglutamate kinase Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
acetylglutamate kinase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_7
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(9798..10514)
DNA (717bp) protein (239aa)
RNAse III (EC:3.1.26.3); K03685 ribonuclease III [EC:3.1.26.3] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RNAse III (EC:3.1.26.3)
Ribonuclease 3 n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CRC6_9CLOT
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_8
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

10637..11014
DNA (378bp) protein (126aa)
Endoribonuclease YbeY n=1 Tax=Clostridium sp. CAG:433 RepID=R6ZCI9_9CLOT
metalloprotease YbeY; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
metalloprotease ybeY
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_9
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

11016..12404
DNA (1389bp) protein (463aa)
cysteinyl-tRNA synthetase (EC:6.1.1.16); K01883 cysteinyl-tRNA synthetase [EC:6.1.1.16] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
cysteinyl-tRNA synthetase (EC:6.1.1.16)
Cysteine--tRNA ligase n=1 Tax=Desulfurobacterium thermolithotrophum (strain DSM 11699 / BSA) RepID=F0S182_DESTD
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_10
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

12373..13275
DNA (903bp) protein (301aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_11
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

13372..13884
DNA (513bp) protein (171aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_12
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

13921..15972
DNA (2052bp) protein (684aa)
kdpB; K+-transporting ATPase subunit B (EC:3.6.3.12); K01547 K+-transporting ATPase ATPase B chain [EC:3.6.3.12] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
kdpB; potassium-transporting ATPase B chain (EC:3.6.3.12)
Potassium-transporting ATPase B chain n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1X8S5_ANEAE
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_13
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

16005..18227
DNA (2223bp) protein (741aa)
kdpD; sensor protein KdpD (EC:2.7.13.3) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
kdpD; sensor protein KdpD (EC:2.7.13.3)
Sensor protein n=1 Tax=Bacillus methanolicus PB1 RepID=I3E0A5_BACMT
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_14
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(18257..19567)
DNA (1311bp) protein (437aa)
Amino acid transporter Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
amino acid transporter id=14627644 bin=bin7_NC10_sister species=Streptomyces cattleya genus=Streptomyces taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=bin7_NC10_sister organism_group=NC10
Amino acid transporter
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_15
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

19608..20948
DNA (1341bp) protein (447aa)
diaminopimelate decarboxylase (EC:4.1.1.20) Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase id=3740070 bin=GWF2_Melainabacteria_37_15 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWF2_Melainabacteria_37_15 organism_group=Melainabacteria
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_16
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(20959..22590)
DNA (1632bp) protein (544aa)
glpD; glycerol-3-phosphate dehydrogenase; K00111 glycerol-3-phosphate dehydrogenase [EC:1.1.5.3] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Glycerol-3-phosphate dehydrogenase n=1 Tax=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) RepID=B1XNB0_SYNP2
glpD; glycerol-3-phosphate dehydrogenase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_17
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

22680..23903
DNA (1224bp) protein (408aa)
Na+ dependent nucleoside transporter domain protein n=1 Tax=Fibrisoma limi BUZ 3 RepID=I2GNN7_9BACT
Na+ dependent nucleoside transporter domain protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Na+ dependent nucleoside transporter domain protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_18
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(23917..24837)
DNA (921bp) protein (307aa)
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta; K00175 2-oxoglutarate ferredoxin oxidoreductase subunit beta [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein n=1 Tax=Acidobacteriaceae bacterium KBS 89 RepID=UPI0003629436
pyruvate ferredoxin/flavodoxin oxidoreductase subunit beta
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_19
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(24865..26658)
DNA (1794bp) protein (598aa)
2-oxoacid--ferredoxin oxidoreductase, alpha subunit; K00174 2-oxoglutarate ferredoxin oxidoreductase subunit alpha [EC:1.2.7.3] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein n=1 Tax=crenarchaeote SCGC AAA261-N23 RepID=UPI000374FA77
2-oxoacid--ferredoxin oxidoreductase, alpha subunit
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_20
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(26725..27042)
DNA (318bp) protein (106aa)
Uncharacterized protein n=1 Tax=Herpetosiphon aurantiacus (strain ATCC 23779 / DSM 785) RepID=A9B059_HERA2
hypothetical protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_21
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(27064..27522)
DNA (459bp) protein (153aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Leptospira broomii serovar Hurstbridge str. 5399 RepID=T0GII0_9LEPT
NifU-like protein associated with Fe-S cluster formation; K04488 nitrogen fixation protein NifU and related proteins Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
NifU-like protein associated with Fe-S cluster formation
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_22
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(27528..28805)
DNA (1278bp) protein (426aa)
SufS subfamily cysteine desulfurase; K11717 cysteine desulfurase / selenocysteine lyase [EC:2.8.1.7 4.4.1.16] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Cysteine desulfurase n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MQ35_9BACT
sufS; cysteine desulfurase, SufS family
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_23
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(28798..29121)
DNA (324bp) protein (108aa)
hypothetical protein n=1 Tax=Candidatus Poribacteria sp. WGA-4E RepID=UPI000382DDEA
putative ferredoxin; K05710 dioxygenase ferredoxin subunit Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
putative ferredoxin
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_24
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(29125..30153)
DNA (1029bp) protein (343aa)
FeS assembly protein SufD; K09015 Fe-S cluster assembly protein SufD Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
FeS assembly protein SufD id=1250295 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
FeS assembly protein SufD
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_25
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(30158..31561)
DNA (1404bp) protein (468aa)
FeS assembly protein SufB Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
FeS assembly protein SufB id=1250294 bin=RBG1 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=RBG1 organism_group=Zixibacteria
FeS assembly protein SufB
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_26
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(31571..32332)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0MJ10_9BACT
FeS assembly ATPase SufC; K09013 Fe-S cluster assembly ATP-binding protein Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
FeS assembly ATPase SufC
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_27
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(32406..32870)
DNA (465bp) protein (155aa)
IscR family transcriptional regulator Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
IscR family transcriptional regulator id=3060056 bin=GWF2_Ignavibacteria_35_20 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWF2_Ignavibacteria_35_20 organism_group=Ignavibacteria
IscR family transcriptional regulator
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_28
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

33043..34761
DNA (1719bp) protein (573aa)
Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_29
RLO_Melainabacteria_35_11, Melainabacteria, Bacteria

Not on your lists

comp(34788..35456)
DNA (669bp) protein (223aa)
metallo-beta-lactamase family protein; K01069 hydroxyacylglutathione hydrolase [EC:3.1.2.6] Tax=RIFCSPLOWO2_12_FULL_Melainabacteria_35_11_curated
Metallo-beta-lactamase family protein id=4622024 bin=GWC2_OP3-like_45_7 species=unknown genus=Cycloclasticus taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
metallo-beta-lactamase
RIFCSPLOWO2_02_FULL_CP_35_15_rifcsplowo2_02_scaffold_166_trna_4
unknown

Not on your lists

comp(35463..35536)
DNA (74bp)
transferRNA
Displaying items 1-30 of 161 in total

View Taxonomy