ggKbase home page

RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_1
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(1..174)
DNA (174bp) protein (58aa)
hypothetical protein Tax=CG_Elusi_01
Uncharacterized protein id=3183064 bin=GWA2_Elusi-like_A8_64_40 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_2
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(194..592)
DNA (399bp) protein (133aa)
hydrogenase expression/formation protein HypE; K04655 hydrogenase expression/formation protein HypE Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Hydrogenase expression/formation protein HypE id=3183063 bin=GWA2_Elusi-like_A8_64_40 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
hydrogenase expression/formation protein HypE
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_3
RIFOXYB2_FULL_Elusimicrobia_62_6_curated, Elusimicrobia, Bacteria

Not on your lists

777..1034
DNA (258bp) protein (86aa)
Tax=RIFOXYB2_FULL_Elusimicrobia_62_6_curated
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_4
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(1122..2069)
DNA (948bp) protein (316aa)
lysR; LysR family transcriptional regulator Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Transcriptional regulator, LysR family id=2151473 bin=GWB2_Elusimicrobium_63_22 species=unknown genus=unknown taxon_order=unknown taxon_class=Opitutae phylum=Verrucomicrobia tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
LysR family transcriptional regulator
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_5
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(2075..3070)
DNA (996bp) protein (332aa)
hydrogenase expression/formation protein HypD; K04654 hydrogenase expression/formation protein HypD Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Hydrogenase expression/formation protein HypD id=4990812 bin=GWA2_Elusi_like_61_42 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=TA06 tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
hydrogenase expression/formation protein HypD
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_trna_2
unknown

Not on your lists

comp(3842..3925)
DNA (84bp)
transferRNA
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_6
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(4000..4242)
DNA (243bp) protein (81aa)
type II secretion system subunit O; K02654 leader peptidase (prepilin peptidase) / N-methyltransferase [EC:3.4.23.43 2.1.1.-] Tax=CG_Elusi_01
Type 4 prepilin-like proteins leader peptide-processing enzyme id=2049630 bin=GWB2_Elusimicrobia_63_16 species=uncultured bacterium URE12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobia_63_16 organism_group=Elusimicrobia
type II secretion system subunit O
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_7
unknown

Not on your lists

4694..4864
DNA (171bp) protein (57aa)

This feature has no annotations

RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_8
R_Elusimicrobia_61_10, Elusimicrobia, Bacteria

Not on your lists

comp(4854..5315)
DNA (462bp) protein (154aa)
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Elusimicrobia_61_10_curated
Putative uncharacterized protein id=4542777 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_trna_1
unknown

Not on your lists

comp(5527..5613)
DNA (87bp)
transferRNA
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_9
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

5676..6164
DNA (489bp) protein (163aa)
SsrA-binding protein; K03664 SsrA-binding protein Tax=CG_Elusi_01
SsrA-binding protein id=2151478 bin=GWB2_Elusimicrobium_63_22 species=uncultured bacterium URE12 genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Elusimicrobium_63_22 organism_group=Elusimicrobia organism_desc=Good -
SsrA-binding protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_10
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(6237..6953)
DNA (717bp) protein (239aa)
hypothetical protein Tax=CG_Elusi_01
Putative uncharacterized protein id=2787917 bin=GWC2_Elusimicrobia_64_44 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWC2_Elusimicrobia_64_44 organism_group=Elusimicrobia organism_desc=Good
hypothetical protein
RIFCSPLOWO2_02_FULL_Elusimicrobia_61_11_rifcsplowo2_02_scaffold_38338_11
CG_Elusi_01, Elusimicrobia, Elusimicrobia, Bacteria

Not on your lists

comp(6966..8321)
DNA (1356bp) protein (452aa)
type IV-A pilus assembly ATPase PilB; K02652 type IV pilus assembly protein PilB Tax=CG_Elusi_01
Type IV-A pilus assembly ATPase PilB id=3183039 bin=GWA2_Elusi-like_A8_64_40 species=Hippea maritima genus=Hippea taxon_order=Desulfurellales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
type IV pilus assembly protein PilB
Displaying 13 items

View Taxonomy