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RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_1
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(497..922)
DNA (426bp) protein (142aa)
TIS1421-transposase protein A n=1 Tax=uncultured planctomycete RepID=H5SCA4_9BACT
TIS1421-transposase protein A Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
TIS1421-transposase protein A
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_2
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1062..2531
DNA (1470bp) protein (490aa)
polyA polymerase; K00970 poly(A) polymerase [EC:2.7.7.19] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
polynucleotide adenylyltransferase id=5803166 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polyA polymerase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_3
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(2980..3126)
DNA (147bp) protein (49aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_4
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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3300..3566
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=1 Tax=Carboxydothermus hydrogenoformans (strain Z-2901 / DSM 6008) RepID=RS15_CARHZ
30S ribosomal protein S15 {ECO:0000313|EMBL:KKW21373.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
rpsO; 30S ribosomal protein S15
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_5
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

3770..4285
DNA (516bp) protein (172aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW21372.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
hypothetical protein id=5803172 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_6
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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4396..4620
DNA (225bp) protein (75aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Putative uncharacterized protein id=4731961 bin=GWC2_OD1_43_27 species=uncultured bacterium genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OD1_43_27 organism_group=OD1 (Parcubacteria) organism_desc=Same as C1_43_61 and D1_43_18 Curated this version (complete)
putative protein family UPF0150
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_7
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4625..4819
DNA (195bp) protein (65aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2A6L7_9BACT
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
YcfA family protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_8
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(5023..5208)
DNA (186bp) protein (62aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_9
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5439..7703
DNA (2265bp) protein (755aa)
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8); K00962 polyribonucleotide nucleotidyltransferase [EC:2.7.7.8] id=5803178 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
polyribonucleotide nucleotidyltransferase (EC:2.7.7.8)
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_10
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7884..8837
DNA (954bp) protein (318aa)
transmembrane_regions Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
transmembrane_regions id=5803179 bin=OD1_GWC2_34_28 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_11
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

8968..9321
DNA (354bp) protein (118aa)
TraR/DksA family transcriptional regulator n=1 Tax=candidate division OD1 bacterium RAAC4_OD1_1 RepID=V7PZI6_9BACT
TraR/DksA family transcriptional regulator Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
yocK; transcriptional regulator, TraR/DksA family protein YocK
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_12
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

9412..10989
DNA (1578bp) protein (526aa)
Mg chelatase subunit ChlI; K07391 magnesium chelatase family protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
id=5227380 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
Mg chelatase subunit ChlI
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_13
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(11397..12542)
DNA (1146bp) protein (382aa)
peptidase M23 family protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
peptidase M23 family protein id=5803183 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
peptidase M23 family protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_14
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

12775..14910
DNA (2136bp) protein (712aa)
pcrA1; ATP-dependent DNA helicase PcrA (EC:3.6.4.12); K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
ATP-dependent DNA helicase PcrA; K03657 DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12] id=5803184 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
pcrA1; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_15
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists


15014..15835
DNA (822bp) protein (274aa)
ksgA; dimethyladenosine transferase; K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
dimethyladenosine transferase (EC:2.1.1.-); K02528 16S rRNA (adenine1518-N6/adenine1519-N6)-dimethyltransferase [EC:2.1.1.182] id=5803185 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
16S rRNA methyltransferase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_16
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(15879..16340)
DNA (462bp) protein (154aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_9225_17
unknown

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16359..16424
DNA (66bp) protein (22aa)

This feature has no annotations

Displaying 17 items

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