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RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_1
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

1..198
DNA (198bp) protein (66aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_2
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

262..429
DNA (168bp) protein (56aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_3
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(354..1055)
DNA (702bp) protein (234aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_4
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(1098..1739)
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00036980AE
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_5
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists


1786..2916
DNA (1131bp) protein (377aa)
RNA binding S1 domain protein {ECO:0000313|EMBL:KKW19385.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
RNA binding S1 domain-containing protein; K02945 small subunit ribosomal protein S1 id=5803531 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
30S ribosomal protein S1
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_6
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(3405..4007)
DNA (603bp) protein (201aa)
Aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
Aminoacyl-tRNA hydrolase (EC:3.1.1.29); K01056 peptidyl-tRNA hydrolase, PTH1 family [EC:3.1.1.29] id=5803533 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
aminoacyl-tRNA hydrolase (EC:3.1.1.29)
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_7
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

4193..4804
DNA (612bp) protein (204aa)
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
signal peptidase I (EC:3.4.21.89); K03100 signal peptidase I [EC:3.4.21.89] id=5803493 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
signal peptidase I (EC:3.4.21.89)
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_8
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

5242..6678
DNA (1437bp) protein (479aa)
hisS1; histidyl-tRNA synthetase; K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hisS; histidyl-tRNA synthetase (EC:6.1.1.21)
id=5227159 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_9
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

6675..7100
DNA (426bp) protein (142aa)
seg Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_10
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7107..7490
DNA (384bp) protein (128aa)
hypothetical protein; K07042 probable rRNA maturation factor Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein; K07042 probable rRNA maturation factor id=5803490 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_11
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

7577..8758
DNA (1182bp) protein (394aa)
cell division protein FtsA; K03590 cell division protein FtsA Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
cell division protein FtsA; K03590 cell division protein FtsA id=5803489 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
cell division protein FtsA
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_12
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

9947..11092
DNA (1146bp) protein (382aa)
Cell division protein ftsZ {ECO:0000313|EMBL:KKW19066.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
id=5227125 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
cell division protein FtsZ
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_13
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

11204..12193
DNA (990bp) protein (330aa)
alkyl hydroperoxide reductase subunit F (EC:1.6.99.3); K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
alkyl hydroperoxide reductase subunit F; K03387 alkyl hydroperoxide reductase subunit F [EC:1.6.4.-] id=5803486 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
Alkyl hydroperoxide reductase protein F
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_14
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

comp(12445..12723)
DNA (279bp) protein (93aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_15
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

13389..15290
DNA (1902bp) protein (634aa)
ABC transporter ATP-binding protein; K06147 ATP-binding cassette, subfamily B, bacterial Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein id=5801897 bin=GWE2_OD1_42_8 species=GW2011_OD1_1 genus=GW2011_OD1_1 taxon_order=GW2011_OD1_1 taxon_class=GW2011_OD1_1 phylum=OD1 tax=GWE2_OD1_42_8 organism_group=OD1 (Parcubacteria) organism_desc=GW2011_OD1_1 GW2011_A
hypothetical protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_16
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists


15298..16581
DNA (1284bp) protein (428aa)
Uncharacterized protein (Fragment) n=1 Tax=uncultured bacterium RepID=K2A3H7_9BACT
O-sialoglycoprotein endopeptidase {ECO:0000313|EMBL:KKW21414.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
gcp; O-sialoglycoprotein endopeptidase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_17
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists


16904..19069
DNA (2166bp) protein (722aa)
Valyl-tRNA synthetase {ECO:0000313|EMBL:KKW21413.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Valyl-tRNA synthetase id=3486328 bin=GWA1_ZB2_49_26 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
Valyl-tRNA synthetase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_18
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

19169..19900
DNA (732bp) protein (244aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
hypothetical protein id=5803648 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
hypothetical protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_19
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

Not on your lists

20193..20678
DNA (486bp) protein (162aa)
heat shock protein Hsp20; K13993 HSP20 family protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
heat shock protein Hsp20; K13993 HSP20 family protein id=5803649 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
heat shock protein Hsp20
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_trna_1
unknown

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20890..20962
DNA (73bp)
transferRNA
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_14924_20
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

Not on your lists

comp(20901..22628)
DNA (1728bp) protein (576aa)
Recombinase {ECO:0000313|EMBL:KKW21410.1}; Flags: Fragment;; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Recombinase id=3486293 bin=GWA1_ZB2_49_26 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
recombinase
Displaying 21 items

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