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This organism can only be binned in the context of its binning project CG1_02_SUB10. Please contact the project owner (jbanfield@berkeley.edu) to become a member and gain access.

RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537_1
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(2..361)
-----------------
DNA (360bp)
protein (120aa)
UDP-glucose 4-epimerase Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
UDP-glucose 4-epimerase id=3064650 bin=GWF2_CPR3_35_18 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=GWF2_CPR3_35_18 organism_group=CPR3
NAD-dependent dehydratase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537_2
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(514..1299)
-----------------
DNA (786bp)
protein (262aa)
Glycosyltransferases n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D278_PELTS
WcaA; glycosyltransferases Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
WcaA; glycosyltransferases
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537_3
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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1314..2165
-----------------
DNA (852bp)
protein (284aa)
Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537_4
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(2316..3851)
-----------------
DNA (1536bp)
protein (512aa)
hypothetical protein Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
CalU22 id=1811966 bin=GWD2_CPR2_39_7 species=Micromonospora echinospora genus=Micromonospora taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWD2_CPR2_39_7 organism_group=CPR2 organism_desc=Same as C1_41_48, C2_39_35, D1_39_7
hypothetical protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537_5
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(3971..4645)
-----------------
DNA (675bp)
protein (225aa)
glucose-1-phosphate thymidylyltransferase; K04042 bifunctional UDP-N-acetylglucosamine pyrophosphorylase / Glucosamine-1-phosphate N-acetyltransferase [EC:2.7.7.23 2.3.1.157] Tax=RIFCSPLOWO2_02_RIF_OD
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FQG0_9BACT
glucose-1-phosphate thymidylyltransferase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537_6
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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comp(4844..5455)
-----------------
DNA (612bp)
protein (204aa)
hypothetical protein n=1 Tax=SAR324 cluster bacterium SCGC AAA240-J09 RepID=UPI00030A0B13
Sugar isomerase {ECO:0000313|EMBL:KKW22158.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Sugar isomerase family protein
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_24537_7
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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comp(5529..6176)
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein n=1 Tax=Nitrospina sp. AB-629-B06 RepID=UPI00036AFA03
Transaldolase {ECO:0000313|EMBL:KKW22157.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
translaldolase
Displaying 7 items

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