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RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526

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Displaying 7 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526_1
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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1..1479
-----------------
DNA (1479bp)
protein (493aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA040-L21 RepID=UPI0003699FC0
UDP-N-acetylglucosamine 1-carboxyvinyltransferase {ECO:0000313|EMBL:KKW19905.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
UDP-N-acetylglucosamine 1-carboxyvinyltransferase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526_2
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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1543..1824
-----------------
DNA (282bp)
protein (94aa)
Marine sediment metagenome DNA, contig: S01H4_S18847 Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526_3
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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1905..2474
-----------------
DNA (570bp)
protein (190aa)
PDF1A; peptide deformylase 1A; K01462 peptide deformylase [EC:3.5.1.88] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
peptide deformylase; K01462 peptide deformylase [EC:3.5.1.88] id=5227160 bin=RAAC4_OD1 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=RAAC4_OD1 organism_group=OD1 (Parcubacteria)
peptide deformylase (EC:3.5.1.88)
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526_4
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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2524..3396
-----------------
DNA (873bp)
protein (291aa)
methionyl-tRNA formyltransferase; K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
methionyl-tRNA formyltransferase (EC:2.1.2.9); K00604 methionyl-tRNA formyltransferase [EC:2.1.2.9] id=5803612 bin=OD1_GWC2_34_28 species=RAAC4_OD1 genus=RAAC4_OD1 taxon_order=RAAC4_OD1 taxon_class=RAAC4_OD1 phylum=OD1 tax=OD1_GWC2_34_28 organism_group=OD1 (Parcubacteria) organism_desc=Complete genome
methionyl-tRNA formyltransferase
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526_5
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(3445..4374)
-----------------
DNA (930bp)
protein (310aa)
RNA polymerase sigma factor SigA n=1 Tax=Dethiosulfovibrio peptidovorans DSM 11002 RepID=D2Z8X5_9BACT
sigma-70 family RNA polymerase sigma factor Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
sigma-70 family RNA polymerase sigma factor
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526_6
R_RIF_OD1_11_50_13, RIF-OD1-11, Parcubacteria, Bacteria

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comp(4862..5560)
-----------------
DNA (699bp)
protein (233aa)
peptidyl-prolyl isomerase (EC:5.2.1.8); K03768 peptidyl-prolyl cis-trans isomerase B (cyclophilin B) [EC:5.2.1.8] Tax=RIFCSPLOWO2_02_RIF_OD1_11_50_13_curated
peptidyl-prolyl isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase id=2073024 bin=GWE2_OD1_38_254 species=GWE2_OD1_38_254 genus=GWE2_OD1_38_254 taxon_order=GWE2_OD1_38_254 taxon_class=GWE2_OD1_38_254 phylum=OD1 tax=GWE2_OD1_38_254 organism_group=OD1 (Parcubacteria)
RIFCSPLOWO2_02_FULL_OD1_50_120_rifcsplowo2_02_scaffold_39526_7
Parcubacteria bacterium GW2011_GWF2_50_9, Parcubacteria, Bacteria

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comp(5626..6060)
-----------------
DNA (435bp)
protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KKW19388.1}; TaxID=1618975 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWF2_50_9.;"
Sigma 54 modulation protein/ribosomal protein S30EA id=2598220 bin=GWC1_OD1_38_17 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=GWC1_OD1_38_17 organism_group=OD1 (Parcubacteria) organism_desc=Good + Candidate for curation
Displaying 7 items

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