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RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_1
RLO_WOR_2_51_24, WOR-2, Bacteria

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206..1132
-----------------
DNA (927bp)
protein (309aa)
Type IV pilus biogenesis protein PilM id=4326479 bin=GWC2_OP3_44_8 species=Candidatus Nitrospira defluvii genus=Nitrospira taxon_order=Nitrospirales taxon_class=Nitrospira phylum=Nitrospirae tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
type IV pilus assembly protein PilM
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_2
RLO_WOR_2_51_24, WOR-2, Bacteria

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1136..1723
-----------------
DNA (588bp)
protein (196aa)
hypothetical protein id=5029008 bin=GWA2_OP3_53_43 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_3
RLO_WOR_2_51_24, WOR-2, Bacteria

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1728..2372
-----------------
DNA (645bp)
protein (215aa)
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_4
RLO_WOR_2_51_24, WOR-2, Bacteria

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2369..2725
-----------------
DNA (357bp)
protein (119aa)
id=4039616 bin=GWF2_OP3_43_52 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_5
RLO_WOR_2_51_24, WOR-2, Bacteria

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2727..4493
-----------------
DNA (1767bp)
protein (589aa)
Type IV pilus biogenesis protein PilQ id=4326473 bin=GWC2_OP3_44_8 species=unknown genus=Methylophaga taxon_order=Thiotrichales taxon_class=Gammaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
type IV pilus biogenesis protein PilQ
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_6
RLO_WOR_2_51_24, WOR-2, Bacteria

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4595..4876
-----------------
DNA (282bp)
protein (94aa)
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_7
RLO_WOR_2_51_24, WOR-2, Bacteria

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4869..5171
-----------------
DNA (303bp)
protein (101aa)
Uncharacterized protein n=1 Tax=Leptolyngbya sp. PCC 7376 RepID=K9PV06_9CYAN
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_8
RLO_WOR_2_51_24, WOR-2, Bacteria

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5171..6664
-----------------
DNA (1494bp)
protein (498aa)
ribonuclease E n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6C83A
ribonuclease
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_9
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

6675..7115
-----------------
DNA (441bp)
protein (147aa)
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_10
RLO_WOR_2_51_24, WOR-2, Bacteria

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7202..8134
-----------------
DNA (933bp)
protein (311aa)
HNH endonuclease n=1 Tax=Aminicenantes bacterium SCGC AAA252-F08 RepID=UPI0003B53AF3
tellurium resistance protein terE
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_11
RLO_WOR_2_51_24, WOR-2, Bacteria

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comp(8179..8451)
-----------------
DNA (273bp)
protein (91aa)
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_12
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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8622..8936
-----------------
DNA (315bp)
protein (105aa)
rplU; 50S ribosomal protein L21; K02888 large subunit ribosomal protein L21 Tax=RBG_13_WOR_2_41_10_curated
50S ribosomal protein L21 id=4039626 bin=GWF2_OP3_43_52 species=Bartonella tamiae genus=Bartonella taxon_order=Rhizobiales taxon_class=Alphaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
LSU ribosomal protein L21p
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_13
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists


8994..9233
-----------------
DNA (240bp)
protein (80aa)
50S ribosomal protein L27 n=1 Tax=Prochlorococcus marinus (strain MIT 9312) RepID=RL27_PROM9
rpmA; 50S ribosomal protein L27
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_14
RLO_WOR_2_51_24, WOR-2, Bacteria

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9255..10223
-----------------
DNA (969bp)
protein (323aa)
GTPase CgtA id=4326465 bin=GWC2_OP3_44_8 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
GTP-binding protein Obg/CgtA
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_15
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

10220..11005
-----------------
DNA (786bp)
protein (262aa)
Glutamate 5-kinase id=4039632 bin=GWF2_OP3_43_52 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
proB; gamma-glutamyl kinase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_16
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

11068..12327
-----------------
DNA (1260bp)
protein (420aa)
proA; gamma-glutamyl phosphate reductase (EC:1.2.1.41)
Gamma-glutamyl phosphate reductase id=4039635 bin=GWF2_OP3_43_52 species=Desulfurobacterium thermolithotrophum genus=Desulfurobacterium taxon_order=Aquificales taxon_class=Aquificae phylum=Aquificae tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_17
RLO_WOR_2_51_24, WOR-2, Bacteria

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12332..12901
-----------------
DNA (570bp)
protein (190aa)
Nicotinate-nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase id=3686130 bin=GWF2_OP3_38_59 species=Thermincola potens genus=Thermincola taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_38_59 organism_group=OP3 (Omnitrophica) organism_desc=a159
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_13691_18
RLO_WOR_2_51_24, WOR-2, Bacteria

Not on your lists

12914..13828
-----------------
DNA (915bp)
protein (305aa)
Putative magnesium and cobalt transport protein n=1 Tax=uncultured Acidobacteria bacterium RepID=Q7X2U8_9BACT
corA; magnesium Mg(2+) and cobalt Co(2+) transport protein CorA
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
Displaying 18 items

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