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RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_1
RLO_WOR_2_51_24, WOR-2, Bacteria

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1..915
-----------------
DNA (915bp)
protein (305aa)
ADP-heptose--lipopolysaccharide heptosyltransferase id=3681747 bin=GWF2_OP3_43_52 species=Pelobacter carbinolicus genus=Pelobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
ADP-heptose--LPS heptosyltransferase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_2
RLO_WOR_2_51_24, WOR-2, Bacteria

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963..1895
-----------------
DNA (933bp)
protein (311aa)
ADP-L-glycero-D-manno-heptose-6-epimerase id=3177056 bin=GWA2_Elusimicrobia_56_46 species=Elusimicrobium minutum genus=Elusimicrobium taxon_order=Elusimicrobiales taxon_class=Elusimicrobia phylum=Elusimicrobia tax=GWA2_Elusimicrobia_56_46 organism_group=Elusimicrobia organism_desc=Good
ADP-L-glycero-D-manno-heptose-6-epimerase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_3
RLO_WOR_2_51_24, WOR-2, Bacteria

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2030..3034
-----------------
DNA (1005bp)
protein (335aa)
PfkB domain protein id=2245562 bin=GWB2_CP_45_9 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
PfkB domain-containing protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_4
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

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3054..3785
-----------------
DNA (732bp)
protein (244aa)
3-deoxy-D-manno-octulosonate cytidylyltransferase (EC:2.7.7.38)
3-deoxy-D-manno-octulosonate cytidylyltransferase Tax=RBG_13_WOR_2_41_10_curated
3-deoxy-manno-octulosonate cytidylyltransferase id=3681756 bin=GWF2_OP3_43_52 species=Halobacteroides halobius genus=Halobacteroides taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_5
CG_Omnitr_04, Omnitrophica, Bacteria

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3785..5407
-----------------
DNA (1623bp)
protein (541aa)
CTP synthase; K01937 CTP synthase [EC:6.3.4.2] Tax=CG_Omnitr_04
CTP synthase (EC:6.3.4.2)
CTP synthetase n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B3FDA9
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_6
R_OP3X_45_16, OP3X, Bacteria

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5404..6258
-----------------
DNA (855bp)
protein (285aa)
2-dehydro-3-deoxyphosphooctonate aldolase; K01627 2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:2.5.1.55] Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
2-dehydro-3-deoxyphosphooctonate aldolase (EC:2.5.1.55)
2-dehydro-3-deoxyphosphooctonate aldolase id=4817839 bin=GWC2_OP3_44_8 species=Geobacter metallireducens genus=Geobacter taxon_order=Desulfuromonadales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_7
RLO_WOR_2_51_24, WOR-2, Bacteria

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6260..7246
-----------------
DNA (987bp)
protein (329aa)
Uncharacterized protein id=4817838 bin=GWC2_OP3_44_8 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_OP3_44_8 organism_group=OP3 (Omnitrophica) organism_desc=Same as GWF2_43_52
KpsF/GutQ family protein
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_8
RLO_WOR_2_51_24, WOR-2, Bacteria

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7248..7748
-----------------
DNA (501bp)
protein (167aa)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family id=2933833 bin=GWC2_OP3-like_45_7 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_OP3-like_45_7 organism_group=OP3 (Omnitrophica)
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_9
RLO_WOR_2_51_24, WOR-2, Bacteria

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7863..9560
-----------------
DNA (1698bp)
protein (566aa)
Type II secretion system protein E (GspE) id=2050228 bin=GWB2_CP_45_9 species=Acetohalobium arabaticum genus=Acetohalobium taxon_order=Halanaerobiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
type II secretion system protein E (GspE)
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_10
RLO_WOR_2_51_24, WOR-2, Bacteria

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9563..10780
-----------------
DNA (1218bp)
protein (406aa)
Type 4 fimbrial assembly protein pilC id=2050225 bin=GWB2_CP_45_9 species=Candidatus Methylomirabilis oxyfera genus=Candidatus Methylomirabilis taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
pilC; type 4 fimbrial assembly protein PilC
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_11
RLO_WOR_2_51_24, WOR-2, Bacteria

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10800..11258
-----------------
DNA (459bp)
protein (153aa)
Tfp pilus assembly protein PilE-like id=2050222 bin=GWB2_CP_45_9 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=GWB2_CP_45_9 organism_group=Unknown_CP organism_desc=Sibling to OP3 based on rpS3
putative Fimbrial protein precursor (Pilin) (Strain K122-4)
Tax=RIFCSPLOWO2_12_FULL_WOR_2_51_24_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_12
R_OP3X_45_16, OP3X, Bacteria

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11262..11639
-----------------
DNA (378bp)
protein (126aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B6A868
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_13
unknown

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11683..12150
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

RIFCSPLOWO2_02_FULL_OD1_50_19_rifcsplowo2_02_scaffold_7117_14
R_OP3X_45_16, OP3X, Bacteria

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12147..13127
-----------------
DNA (981bp)
protein (327aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B5342B
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_OP3X_45_16_curated
Displaying 14 items

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