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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_110414_1

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(3..533)

Top 3 Functional Annotations

Value Algorithm Source
Type IV b pilus protein n=1 Tax=Pseudomonas aeruginosa VRFPA05 RepID=V4UY96_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 64.8
  • Coverage: 176.0
  • Bit_score: 234
  • Evalue 9.20e-59
pilus assembly protein similarity KEGG
DB: KEGG
  • Identity: 86.4
  • Coverage: 177.0
  • Bit_score: 318
  • Evalue 1.40e-84

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 531
ATGGAAAATGACATCACCCGCCCCGACCCAGCATCCTGGGTCCGCGTCCTGACCTATAACGGCCGCAAGTTCGTGACCGGCCTTTATTGGCATCCACTGAGCACTCCCCGGCAGTTCATGAAGGAGGCGCGTGCCTATGGCAAGGAGCACGGGCTGGATATCGTGGCCATCCGAGAGGCACCCACCAAGATTCAGGCGGGCTTCGTCGCCAAGAAATTGGGCGCGGTCAAGGGCATGTACTCGATGGCCACGGCGCTGGCCGGCCAGTTCGATGCGGACTTCGTGGCCTGCTGGAAGATCGACGAGGACCTATACGCCATCGCCGGCACCGCCGAGGGGGCAATCATTCCCGGCGGGGATCTGGTCACGACGTTCGCCGATGCGAAACAACGCATCACCGTCCTGCAGAACCGCGGCCTGCTGAAGAACGCCCAGCTCTTCGTGCCGGAGGGATTCGGCTTCGACGTCAGGCCTTTTGACATCGAGGAACTGCTCGCCCCCAAGCGCTTGCGCAATGGGTACAAATTACGT
PROTEIN sequence
Length: 177
MENDITRPDPASWVRVLTYNGRKFVTGLYWHPLSTPRQFMKEARAYGKEHGLDIVAIREAPTKIQAGFVAKKLGAVKGMYSMATALAGQFDADFVACWKIDEDLYAIAGTAEGAIIPGGDLVTTFADAKQRITVLQNRGLLKNAQLFVPEGFGFDVRPFDIEELLAPKRLRNGYKLR