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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_110414_2

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(536..2263)

Top 3 Functional Annotations

Value Algorithm Source
R64 PilN family type IVB pilus formation outer membrane protein n=2 Tax=Pseudomonas aeruginosa RepID=U9FVR0_PSEAI similarity UNIREF
DB: UNIREF100
  • Identity: 68.3
  • Coverage: 567.0
  • Bit_score: 752
  • Evalue 2.50e-214
secretin similarity KEGG
DB: KEGG
  • Identity: 77.6
  • Coverage: 575.0
  • Bit_score: 863
  • Evalue 3.70e-248

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1728
ATGATGATCAAGCCCAACCTGAAATCCATCACCGCCCTCACCCTGTTAGCACTCGTCATTTCCGGCTGCGGGATCCAGCGCGTCAACGAGTCGATGCAGCGCAGCGAGGCGGCCGCCGACTCTGCCAGCGCCATTGCGGCAACCCTGCGCAACAACCAGGTGGAACCGAAGCGCGATACCGTCGTTTTCTCCGACAGGCCCTGGGTCAGTACCCAACCGATCGTTTCGAAGCGCGGGCTGACTAAGCACCAGGACTGCACCTTCATCTGGAAGCCGGTTGGCAGCGTCTCCCTTCAGCAGGCGGCGCAGGAGGTAATCAGCCAATGCAAGCTGAACGTGCAAATCACGCCTGATGCGCTCAACCCCGCGGGGTCGATCTCGGCGCCGACCGTGACCAGCAGCTCCCCGCCCACCACCCCGTCCAACCAGGATATGGCAAGCATGCTGTTCCCAAGCTCCGTGGCCGGTGCCGGAGGATCGCTGGGCAATAACTTTGGCTCATTCGGCGGGCTCGGGGCCGGCGGTTCGCGCCTGATCTCCAACATCAGTTGGAACGACAAGGTCTCGGGCTTCCTCGATTTGATCACCTCGCGCAGCGGGGTCTCCTGGCGATTCGATCCTGCTGAGAAGGCGGTCGTCATCTACTACCTCGACACCAAGACCTTCCGGGTCTACGCCTTCGACGACACGACCCATGTCGACTCCACCGTCCGCTCCGGCATGACCGCATCCACCGGGGCCAGCGGAGACGGCTCCTCCGGCGGAGGTGGCGGCGGTTCATCAGGCATCAGTGGTGACTCTGGCAGCACTCAGGCCACCAGCGTCTCCCTCAAGACCTCGATCCTGAATGACATTGAGGGCAGCGTTAAATCGATGCTCACGCCAGGCGTCGGTCGTATGGCGCTGTCCCGTGCCACCGGCACCCTGACCGTCACCGACCGACCGGACGTGCTGCGCAGGGTCGAGCTGGCCATCAACCATGAAAACGACAGCATCACCAAGCAGGTGATCCTCAACGTCAAAGTCGTCACGGTGGAGCTCACGGATCGCGACCAAATCGGCATCGATTGGGATCTTGTCTACAGGTCGCTGAGCAACAAGTGGGGCATTTCACTCAAGAACACTACGCCCGGAATCGACCCGAGTGCGGTCTCAGGTTCGGTCAGCATCTTGGACACGGCGAACAGTGCATGGGCAGGCTCCAACGCGATGCTCCAGGCGCTGTCGCAGCAGAGCCGCATCCTGAGCGTGCGTTCCCCCTCGGTCACGACACTCAACCTGCAGTCAGCGCCGATCCAGATTGGCAGGCTCAAGAGCTATCTCGCCTCCAGCCAGGTCAGCAGCGTGGCGCAAGTGGGAACTACCACTTCCCTGATCCCAGGCACTGTGACCAGCGGCTACAACATGTCGCTGATCCCCTTCGTCATGCCGGACAGCGAGCTGCTGCTGAAGATCAACATCAACATGTCCTCTGAGCCGACATTCGAGACGGTCACCAGCGGCGAGTCCAGAGCTCAATTTCCCAGCTTCGGCGTGCAGATCTTCGACCAGAAGGTGAGGCTGCGTAGTGGCGAAACCCTGGTACTCAGCGGCTTCGAGCAAGACACGGAGGACAGCAGCAAGCTCGGTACCGGCGATTCCGATTTCTTCGGCCTGGGCGGCGGGCGCATGCGTAATACCGGACGAAACGTCATCGTGGTTCTGATTACGCCGGTGGTGATGGGCTGA
PROTEIN sequence
Length: 576
MMIKPNLKSITALTLLALVISGCGIQRVNESMQRSEAAADSASAIAATLRNNQVEPKRDTVVFSDRPWVSTQPIVSKRGLTKHQDCTFIWKPVGSVSLQQAAQEVISQCKLNVQITPDALNPAGSISAPTVTSSSPPTTPSNQDMASMLFPSSVAGAGGSLGNNFGSFGGLGAGGSRLISNISWNDKVSGFLDLITSRSGVSWRFDPAEKAVVIYYLDTKTFRVYAFDDTTHVDSTVRSGMTASTGASGDGSSGGGGGGSSGISGDSGSTQATSVSLKTSILNDIEGSVKSMLTPGVGRMALSRATGTLTVTDRPDVLRRVELAINHENDSITKQVILNVKVVTVELTDRDQIGIDWDLVYRSLSNKWGISLKNTTPGIDPSAVSGSVSILDTANSAWAGSNAMLQALSQQSRILSVRSPSVTTLNLQSAPIQIGRLKSYLASSQVSSVAQVGTTTSLIPGTVTSGYNMSLIPFVMPDSELLLKININMSSEPTFETVTSGESRAQFPSFGVQIFDQKVRLRSGETLVLSGFEQDTEDSSKLGTGDSDFFGLGGGRMRNTGRNVIVVLITPVVMG*