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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_259294_4

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 1616..2341

Top 3 Functional Annotations

Value Algorithm Source
ABC transporter-like protein; K06861 lipopolysaccharide export system ATP-binding protein [EC:3.6.3.-] Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 241.0
  • Bit_score: 470
  • Evalue 1.50e-129
ABC transporter, ATP-binding protein n=1 Tax=Pseudomonas sp. CFII64 RepID=S6ID90_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 95.0
  • Coverage: 241.0
  • Bit_score: 453
  • Evalue 1.70e-124
ABC transporter-like protein similarity KEGG
DB: KEGG
  • Identity: 95.0
  • Coverage: 241.0
  • Bit_score: 451
  • Evalue 1.40e-124

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 726
ATGGCCACTTTGACAGCCCAGCACCTGGCCAAGAGCTACAAAGGCCGCCAAGTCGTGCGCGACGTCAGCCTGAGCATCGACAGCGGGCAGATCGTTGGCCTGCTCGGCCCCAATGGCGCGGGCAAGACCACCTGCTTCTACATGATCGTCGGCCTGGTGCAGGCCGATCAGGGCCGCATCCTGATCGACGACCTCGACGTCAGCCACCTGCCGATGCACGGCCGCGCCCGCGCCGGTGTCGGCTACCTGCCGCAGGAAGCCTCGATTTTCCGCAAGCTCAGCGTGGCCGACAACATCATGGCCATCCTCGAGACCCGCAAGGAACTGGACCGGGCCAGCCGGCGCAAGGAATTGGAAAGCCTGCTGCAGGAATTCCATATCAGCCACATCCGCGACAACCTCGGCATGAGCCTGTCCGGCGGCGAACGCCGGCGCGTGGAAATCGCCCGCGCCCTGGCCACCGCACCGAAATTCATCCTGCTCGACGAACCCTTCGCCGGGGTCGACCCGATCTCGGTCGGCGACATCAAACAGATCATCCACCATCTCAAGGCCAAGGGCATCGGCGTACTGATCACCGACCACAATGTCCGCGAGACCCTGGATATCTGTGAAACCGCCTACATCGTCAGCGATGGCCAACTGATCGCCGAAGGCGATGCCGACGCCATTCTGGCCAACCAACTGGTCAAGGATGTCTACCTGGGGCACGAGTTCCGCCTGTAA
PROTEIN sequence
Length: 242
MATLTAQHLAKSYKGRQVVRDVSLSIDSGQIVGLLGPNGAGKTTCFYMIVGLVQADQGRILIDDLDVSHLPMHGRARAGVGYLPQEASIFRKLSVADNIMAILETRKELDRASRRKELESLLQEFHISHIRDNLGMSLSGGERRRVEIARALATAPKFILLDEPFAGVDPISVGDIKQIIHHLKAKGIGVLITDHNVRETLDICETAYIVSDGQLIAEGDADAILANQLVKDVYLGHEFRL*