ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_18

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(16271..17170)

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=3 Tax=Pseudomonas RepID=U7REH7_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 299.0
  • Bit_score: 594
  • Evalue 4.60e-167
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 299.0
  • Bit_score: 594
  • Evalue 1.30e-167
LysR family transcriptional regulator {ECO:0000313|EMBL:AIG01240.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 299.0
  • Bit_score: 594
  • Evalue 6.40e-167

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Pseudomonas fluorescens → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 900
ATGACCTCCGAAGATTCCTTCAGCGGCATCCATATTTTTCTCGCCACCGCCCGCTCTGCGACCTTCACAGAGGCAGCCGAGCGCCTGGGGCTGTCCAAGTCGGCCGTAGGTAAGGCGATTGCACGGCTGGAGGCACGGGTGGGTACCAGCCTGTTTTATCGCTCGACCCGCCGCTTGTCCCTGTCTCCGGATGGCGAGGCCTACTTCACCGTGTGGTCCAATGCGCTGGAGGAGATCAAGGCCACCGAGAGCAACCTCGGCAACAAGTTAGGCGTGCCCACAGGGCGCTTGCGGGTGGACATGCCGGTCGCGTTCGGTAAACAGGTGGTACTGCCGGTGCTACTGGAGATGAGCAAACGCTTCCCGCAGTTGCAACTGACCTTGACCTTTAGCGACCAACTGGTGGACCTGACGGAAGAAGGTATCGACCTGGCCATTCGTTTTGGCAGCGTCGACAACGTCCCCGGCCTGGTGGCCAGACGCCTGACGTCACACCGCTGGGTAACCTGTGCAGCGCCGGGTTATCTGGAAGAATATGGTACGCCGTTGACGCTCGAGGACATGGGCCAGCACCGCAGCATCGTCGGCTATCGCCGCGGCAGCCTAATGCCCTGGAAAATGGCCCAGGCCGGGCAATCCTTGAAGTTCTCGCCACCACCGACCTATCAGTTTGACGATGCCGAAGCGATGATTGAAGCCACGCGAGCCGGCCTCGGTATTTGCCAGATGCCGCTCTGTCTATTTGAAAAGGACATCGCCCAGCAGGTTGTTGTTACGGTACTCGAGCCCTTTGAACCGGCGCCTGTCGAGGTCCACGCACTATGGTCGAAGAGCAATCATCTGCGGCCCAAAATTCGTTACCTGGTCGACGAGTTATTGAAGCTGTATGGCCACAGCTAA
PROTEIN sequence
Length: 300
MTSEDSFSGIHIFLATARSATFTEAAERLGLSKSAVGKAIARLEARVGTSLFYRSTRRLSLSPDGEAYFTVWSNALEEIKATESNLGNKLGVPTGRLRVDMPVAFGKQVVLPVLLEMSKRFPQLQLTLTFSDQLVDLTEEGIDLAIRFGSVDNVPGLVARRLTSHRWVTCAAPGYLEEYGTPLTLEDMGQHRSIVGYRRGSLMPWKMAQAGQSLKFSPPPTYQFDDAEAMIEATRAGLGICQMPLCLFEKDIAQQVVVTVLEPFEPAPVEVHALWSKSNHLRPKIRYLVDELLKLYGHS*