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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056

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Displaying items 1-30 of 58 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_1
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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227..2044
-----------------
DNA (1818bp)
protein (606aa)
UPI0003D65D91 related cluster n=1 Tax=unknown RepID=UPI0003D65D91
integrase catalytic subunit Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
integrase catalytic subunit
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_2
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2041..2901
-----------------
DNA (861bp)
protein (287aa)
UPI0003D657BF related cluster n=1 Tax=unknown RepID=UPI0003D657BF
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC35771.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. T
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_3
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2904..3947
-----------------
DNA (1044bp)
protein (348aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida ND6 RepID=I3V4P0_PSEPU
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
hypothetical protein
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_4
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4364..4522
-----------------
DNA (159bp)
protein (53aa)
Uncharacterized protein n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6V085_9PSED
hypothetical protein
ferrichrome-iron receptor; K02014 iron complex outermembrane recepter protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_5
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4801..5190
-----------------
DNA (390bp)
protein (130aa)
PepSY-associated TM helix n=1 Tax=Cellvibrio sp. BR RepID=I3IAW6_9GAMM
iron-regulated membrane protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
iron-regulated membrane protein
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_6
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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5177..5317
-----------------
DNA (141bp)
protein (47aa)
PepSY-associated TM helix n=1 Tax=Cellvibrio sp. BR RepID=I3IAW6_9GAMM
PepSY-associated TM helix domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
peptidase
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_7
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5329..6159
-----------------
DNA (831bp)
protein (277aa)
PepSY-associated TM helix n=1 Tax=Cellvibrio sp. BR RepID=I3IAW6_9GAMM
PepSY domain-containing protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
PepSY domain-containing protein
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_8
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6256..6573
-----------------
DNA (318bp)
protein (106aa)
UPI0002DD9C68 related cluster n=1 Tax=unknown RepID=UPI0002DD9C68
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG01232.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_9
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7471..7761)
-----------------
DNA (291bp)
protein (97aa)
DNA-binding protein n=2 Tax=Pseudomonas RepID=V6V0N3_9PSED
DNA-binding protein
DNA-binding protein {ECO:0000313|EMBL:AIN58590.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_10
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7844..8281
-----------------
DNA (438bp)
protein (146aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=V6V068_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC35766.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. T
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_11
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8680..8844)
-----------------
DNA (165bp)
protein (55aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=V6UZQ9_9PSED
hypothetical protein
Uncharacterized protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_12
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9469..9789)
-----------------
DNA (321bp)
protein (107aa)
hypothetical protein Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_13
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11164..12255)
-----------------
DNA (1092bp)
protein (364aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7REN4_PSEPU
integrase
Integrase {ECO:0000313|EMBL:AHC35761.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_14
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12400..13389
-----------------
DNA (990bp)
protein (330aa)
Recombinase n=1 Tax=Pseudomonas mosselii SJ10 RepID=V6UZ08_9PSED
recombinase
Recombinase {ECO:0000313|EMBL:AHC35760.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_15
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13941..14264
-----------------
DNA (324bp)
protein (108aa)
Uncharacterized protein n=2 Tax=Pseudomonas RepID=V7D498_9PSED
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHC35759.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. T
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_16
Pseudomonas sp. TKP, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14325..14996)
-----------------
DNA (672bp)
protein (224aa)
Uncharacterized protein n=1 Tax=Pseudomonas putida SJ3 RepID=U7RDD9_PSEPU
phospholipase
Phospholipase {ECO:0000313|EMBL:AHC35758.1}; TaxID=1415630 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas sp. TKP.;"
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_17
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14993..15808)
-----------------
DNA (816bp)
protein (272aa)
Catalytic LigB subunit of aromatic ring-opening dioxygenase n=3 Tax=Pseudomonas RepID=U7RG86_PSEPU
catalytic subunit of aromatic ring-opening dioxygenase rbh
Aromatic ring-opening dioxygenase LigB {ECO:0000313|EMBL:AIG01239.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudo
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_18
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16271..17170)
-----------------
DNA (900bp)
protein (300aa)
LysR family transcriptional regulator n=3 Tax=Pseudomonas RepID=U7REH7_PSEPU
LysR family transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:AIG01240.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_19
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17333..17689
-----------------
DNA (357bp)
protein (119aa)
Uncharacterized protein n=3 Tax=Pseudomonas RepID=U7RCN9_PSEPU
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIG01241.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluoresce
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_20
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17784..18578
-----------------
DNA (795bp)
protein (265aa)
Oxidoreductase n=2 Tax=Pseudomonas RepID=V6UZN8_9PSED
oxidoreductase
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:ETK14115.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="P
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_21
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19353..19757)
-----------------
DNA (405bp)
protein (135aa)
Membrane protein n=3 Tax=Pseudomonas RepID=U7RDH1_PSEPU
membrane protein
Membrane protein {ECO:0000313|EMBL:AIN58580.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas mosselii SJ1
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_22
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19841..20470)
-----------------
DNA (630bp)
protein (210aa)
NADPH-dependent F420 reductase n=3 Tax=Pseudomonas RepID=U7RCR1_PSEPU
NADPH-dependent F420 reductase
NADP oxidoreductase, coenzyme F420-dependent; K06988 Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_23
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20574..21518
-----------------
DNA (945bp)
protein (315aa)
LysR family transcriptional regulator n=3 Tax=Pseudomonas RepID=U7RD91_PSEPU
LysR family transcriptional regulator
Regulatory protein, LysR:LysR, substrate-binding protein {ECO:0000313|EMBL:ETK14118.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_24
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21558..21755)
-----------------
DNA (198bp)
protein (66aa)
Tautomerase n=3 Tax=Pseudomonas RepID=U7RE10_PSEPU
tautomerase
Tautomerase {ECO:0000313|EMBL:AIG01245.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_25
R_Pseudomonas_63_210, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21989..22360)
-----------------
DNA (372bp)
protein (124aa)
Transposase IS4 n=3 Tax=Pseudomonas RepID=U7RGG0_PSEPU
transposase, IS4 Tax=RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_curated
transposase IS1301
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_26
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22659..23813)
-----------------
DNA (1155bp)
protein (385aa)
Acyl-CoA dehydrogenase n=1 Tax=Pseudomonas putida SJ3 RepID=U7RCI2_PSEPU
acyl-CoA dehydrogenase
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:AIG01247.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescen
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_27
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23875..24741)
-----------------
DNA (867bp)
protein (289aa)
IclR family transcriptional regulator n=3 Tax=Pseudomonas RepID=U7REQ9_PSEPU
IclR family transcriptional regulator
IclR family transcriptional regulator {ECO:0000313|EMBL:AIG01248.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudom
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_28
Pseudomonas sp. FH1, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24978..25763
-----------------
DNA (786bp)
protein (262aa)
Enoyl-CoA hydratase {ECO:0000313|EMBL:ETK14123.1}; EC=4.2.1.17 {ECO:0000313|EMBL:ETK14123.1};; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae;
Enoyl-CoA hydratase n=2 Tax=Pseudomonas RepID=V6V055_9PSED
enoyl-CoA hydratase
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_29
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25767..27308
-----------------
DNA (1542bp)
protein (514aa)
3-hydroxyacyl-CoA dehydrogenase (EC:1.1.1.157)
3-hydroxyacyl-CoA dehydrogenase {ECO:0000313|EMBL:AIN58573.1}; EC=1.1.1.157 {ECO:0000313|EMBL:AIN58573.1};; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseud
3-hydroxyacyl-CoA dehydrogenase n=3 Tax=Pseudomonas RepID=U7RG92_PSEPU
RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_30
Pseudomonas mosselii, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27318..28520
-----------------
DNA (1203bp)
protein (401aa)
Acetyl-CoA acetyltransferase n=3 Tax=Pseudomonas RepID=U7REI4_PSEPU
acetyl-CoA acetyltransferase
Beta-ketoadipyl CoA thiolase {ECO:0000313|EMBL:AIN58572.1}; TaxID=1388763 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas
Displaying items 1-30 of 58 in total

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