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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_1056_23

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: 20574..21518

Top 3 Functional Annotations

Value Algorithm Source
LysR family transcriptional regulator n=3 Tax=Pseudomonas RepID=U7RD91_PSEPU similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 616
  • Evalue 1.50e-173
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 616
  • Evalue 4.30e-174
Regulatory protein, LysR:LysR, substrate-binding protein {ECO:0000313|EMBL:ETK14118.1}; TaxID=1284392 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudom similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 314.0
  • Bit_score: 616
  • Evalue 2.20e-173

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Taxonomy

Pseudomonas sp. FH1 → Pseudomonas → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 945
ATGGATCGCGCGTTGGAGATGCAGGTGTTTTGCGCCGTGGTCGACAAGGGCAGCTTTGTCGGTGCCGTCGATGCGCTGGAAATGTCCAAGGCCGCCGTTTCCAGGCATGTAAATGCGCTGGAGGAACGCCTGGGCGTACGCCTGCTGCAACGCACCACGCGACGCTTATCACTGACCGAAGAAGGACGGGTTTTCTACCAGCAAGCGCGGGAAGTGCTGGCGTTGATGGGGGAGGCGGAAAGCGCTGTTTCTTCGGGCAACCATGAGCCTGCCGGCGTGCTGCGGGTCAATGCGCCGGTGAGTTTTGGTGTGTTGCACCTGGCGCCGCTGTGGACTGCCTTTTTGGAGCAAAACCCGAAGATTGAGCTGGATATCAGCCTGAACGATCGCCAGGTCGATTTGGTGGAGGAGGGGTATGACGTCGCGGTGCGCATCGCCCGGTTGGAAAGCTCTTCACTGGTGGGGCGCCGGTTTGCCAGCACGCGGATGCGCCTGTGTGCAGCCCCGAGCTACATCAAAAGCCATGCACCAGTAGAAGTGCCGCAAGACCTGGCCGAGCACCGGGTGATTGCCTATAGCAACTTTTCCAGTGGGAACGAATGGAGTTTTACCGGGCCCGATGGCGAGCATAAGGTCAACACGCGTTCGGTCATTCGCTGCAATAACGGTGATACATGCCGATCTATTGCGTTGACTGCTGGCGGCATTTTGCTGCAGCCAAGCTTTATGGTAAGTGAGGATCTTCGGCGGGGTGATCTGGTGGAGTTGCTACCGGAGTATCGCTCGGTAGAACTGGGTATTTATGCCGTCTACCCAACCCGCAAACACCTGGCATCCAAGGTGCGGGCATTTATCAATTTTCTGGTCGAACAGTTTGAGCAGGTCGACTGGGAGTCCGGCTACCCAGCACAAAAGAGCCAAGCCCGGGCTGCAAAGAAGATGTAA
PROTEIN sequence
Length: 315
MDRALEMQVFCAVVDKGSFVGAVDALEMSKAAVSRHVNALEERLGVRLLQRTTRRLSLTEEGRVFYQQAREVLALMGEAESAVSSGNHEPAGVLRVNAPVSFGVLHLAPLWTAFLEQNPKIELDISLNDRQVDLVEEGYDVAVRIARLESSSLVGRRFASTRMRLCAAPSYIKSHAPVEVPQDLAEHRVIAYSNFSSGNEWSFTGPDGEHKVNTRSVIRCNNGDTCRSIALTAGGILLQPSFMVSEDLRRGDLVELLPEYRSVELGIYAVYPTRKHLASKVRAFINFLVEQFEQVDWESGYPAQKSQARAAKKM*