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RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_402560_4

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1468..1653)

Top 3 Functional Annotations

Value Algorithm Source
topA; DNA topoisomerase I (EC:5.99.1.2) similarity KEGG
DB: KEGG
  • Identity: 90.6
  • Coverage: 53.0
  • Bit_score: 109
  • Evalue 2.60e-22
topoisomerase I n=1 Tax=Pseudomonas sp. PAMC 25886 RepID=UPI000289CA6C similarity UNIREF
DB: UNIREF100
  • Identity: 90.6
  • Coverage: 53.0
  • Bit_score: 110
  • Evalue 7.00e-22

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Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 186
ATGCGCCGAAGAAAnnnnnnnnTCCTCTGTGATGCGCCGAAGAAAGACCCGGAAGGTCGTGCGGCGGTTATTCGCTTCAGCCGCAAGACCAAAGAGCAGTACGTGCAGACTGAGGTCGAAGGCAAGCCGACCGGCTGGCGTGCCTTTTATGATGGCGGCAAGTGGAAGGTCGAAGACAAGCGTTGA
PROTEIN sequence
Length: 62
MRRRXXXXLCDAPKKDPEGRAAVIRFSRKTKEQYVQTEVEGKPTGWRAFYDGGKWKVEDKR*