ggKbase home page

RIFCSPLOWO2_02_FULL_Pseudomonas_63_210_rifcsplowo2_02_scaffold_402560_5

Organism: Pseudomonadales bacterium RIFCSPLOWO2_02_FULL_63_210

partial RP 38 / 55 MC: 6 BSCG 40 / 51 MC: 6 ASCG 6 / 38 MC: 3
Location: comp(1622..2113)

Top 3 Functional Annotations

Value Algorithm Source
DNA topoisomerase 1 n=2 Tax=Pseudomonas RepID=J3FTU0_9PSED similarity UNIREF
DB: UNIREF100
  • Identity: 92.9
  • Coverage: 156.0
  • Bit_score: 318
  • Evalue 3.50e-84
DNA topoisomerase I subunit omega similarity KEGG
DB: KEGG
  • Identity: 92.9
  • Coverage: 156.0
  • Bit_score: 317
  • Evalue 2.20e-84

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

R_Pseudomonas_63_210 → Pseudomonadales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 492
CAGAAGTGCGGCACCGCCATGGATGCCTACCTGCTCGACGAGACGCGCAAGCTGCATATCTGCGGCAACAACCCGGATTGCACGGGCTACGAGATCGAACAGGGCCAATACCGGATCAAGGGTTACGAAGGCCCAAGCCTGGAGTGCGACAAGTGTGGCAGCCAGATGCAGCTGAAGACCGGGCGTTTCGGCAAGTTCTTCGGTTGCACCAACACTGAGTGCAAGAACACCCGCAAGCTGCTGAAAAGCGGTGAGGCTGCTCCGCCGAAGATGGATCCGGTGAAAATGCCCGAACTCAAGTGCGAGAAGGTCAATGACACCTATATCTTGCGCGACGGTGCATCGGGTTTGTTCCTGGCCGCCAGTCAGTTTCCGAAGAACCGTGAAACCCGGGCGCCGCTGGTGCTGGAGCTGATTCCGCACAAAGACGAGATCGATCCGAAGTATCACTTCCTCTGTGATGCGCCGAAGAAAnnnnnnnnTCCTCTGTGA
PROTEIN sequence
Length: 164
QKCGTAMDAYLLDETRKLHICGNNPDCTGYEIEQGQYRIKGYEGPSLECDKCGSQMQLKTGRFGKFFGCTNTECKNTRKLLKSGEAAPPKMDPVKMPELKCEKVNDTYILRDGASGLFLAASQFPKNRETRAPLVLELIPHKDEIDPKYHFLCDAPKKXXXPL*