ggKbase home page

rifcsplowo2_12_scaffold_2302_23

Organism: RIFCSPLOWO2_12_FULL_Archaea_Woesearchaeota_46_25

near complete RP 37 / 55 MC: 4 BSCG 12 / 51 ASCG 33 / 38 MC: 1
Location: 21495..22505

Top 3 Functional Annotations

Value Algorithm Source
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud similarity UNIPROT
DB: UniProtKB
  • Identity: 57.1
  • Coverage: 324.0
  • Bit_score: 395
  • Evalue 6.40e-107
Probable tRNA pseudouridine synthase B n=13 Tax=Thermococcaceae RepID=TRUB_PYRFU id=5103295 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome similarity UNIREF
DB: UNIREF100
  • Identity: 57.1
  • Coverage: 324.0
  • Bit_score: 395
  • Evalue 4.60e-107
putative tRNA pseudouridine synthase B similarity KEGG
DB: KEGG
  • Identity: 57.1
  • Coverage: 324.0
  • Bit_score: 395
  • Evalue 1.30e-107

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR20 → Archaea

Sequences

DNA sequence
Length: 1011
ATGAACCAACTCCCATTCGAAAAAATCAAACGAGAAATCATCGTCAAACGCGAAGCGCAGACAAATCCATCAGTTGGACACGACCCTGAAAAACGCCCAACAGAGCTGCTTCTCAAATACGGAGTAATAAATCTCAACAAGCCAAAAGGCCCAACGTCCCACATGGCTTCTGACTACGTGCAAAGAATACTCAAAATAGACAAAGCAGGACACGGCGGAAGCTTAGACCCCGGAGTCACAGGAGTTCTACCTGTAGCGCTCGAACGAGCGACGCGCATAGTGCAGACCCTGCTTCCCGCAGGCAAAGAATACGTTTGCATAATGCACTTGCACAGGCCAGTTTCACTGCAAGACCTTGAACGGGCAATCAAAAGCTTCACAGGCAAGATAACACAGCTCCCTCCAGTCAAATCAGCAGTCGTTCGCAAAGAACGCGAGCGAGAGATTTACTATTTCGAAGTCCTCGAGATAGATGGACAAGACGTCCTATTCAAGATGGGCTGCCAAGGAGGAACATACGTTCGCAAAGTATGCCACGATATGGGCAGAATGCTTAAATGCGGAGCGCACATGGCAGAACTGATTCGCACAAAAGCAGGCCCGTTCACAGACAAGAATTGGGTCAGCCTGCAAGACCTTGAAGACGCGTACGGATACTGGACAGAAGAAGGAAACGATAAATTTCTAAGATACTGTATACGCCCTGTCGAAACATCAATCCAACACTTGCCAAAACTATGGATCCAAGATAGCGCGGTCGATACGCTCTGCCACGGAGCAAGCCTCAATCTGCCAGGCGTAGTCAAATTCGAAAGCGCAATAGCCAAAGACGATATGGTCGCAGTCCTCACACTCAAAGGAGAATTAGTTGCCCTTGGCGAAGCGTTCATGACCTCAGAGCAGATGATAAGTGAAGAGAAGGGCCTTTGCGTCAAAATCAGCAAGGTATTCATGTTAGAGGGGACATATCCTCGACATTTGCCGCAAAAATCCAGTTTTGATCCTTTATAA
PROTEIN sequence
Length: 337
MNQLPFEKIKREIIVKREAQTNPSVGHDPEKRPTELLLKYGVINLNKPKGPTSHMASDYVQRILKIDKAGHGGSLDPGVTGVLPVALERATRIVQTLLPAGKEYVCIMHLHRPVSLQDLERAIKSFTGKITQLPPVKSAVVRKEREREIYYFEVLEIDGQDVLFKMGCQGGTYVRKVCHDMGRMLKCGAHMAELIRTKAGPFTDKNWVSLQDLEDAYGYWTEEGNDKFLRYCIRPVETSIQHLPKLWIQDSAVDTLCHGASLNLPGVVKFESAIAKDDMVAVLTLKGELVALGEAFMTSEQMISEEKGLCVKISKVFMLEGTYPRHLPQKSSFDPL*