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rifcsplowo2_12_scaffold_2302

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_2302_1
CG_Woesearch_01, Woesearchaeota, Archaea

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178..816
-----------------
DNA (639bp)
protein (213aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=CG_Woesearch_01
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003791C71
Proteasome subunit beta
rifcsplowo2_12_scaffold_2302_2
CG_Woesearch_02, Woesearchaeota, Archaea

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840..2732
-----------------
DNA (1893bp)
protein (631aa)
KH-domain/beta-lactamase-domain-containing protein; K07041 Tax=CG_Woesearch_02
KH-domain/beta-lactamase-domain protein id=5799852 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
kh-domain/beta-lactamase-domain-containing protein
rifcsplowo2_12_scaffold_2302_3
unknown

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2734..3174
-----------------
DNA (441bp)
protein (147aa)

This feature has no annotations

rifcsplowo2_12_scaffold_2302_4
unknown

Not on your lists

3337..3480
-----------------
DNA (144bp)
protein (48aa)

This feature has no annotations

rifcsplowo2_12_scaffold_2302_5
unknown

Not on your lists

4042..4743
-----------------
DNA (702bp)
protein (234aa)

This feature has no annotations

rifcsplowo2_12_scaffold_2302_6
RBG_13_OD1_Moranbacteria_45_13_curated, Moranbacteria, Parcubacteria, Bacteria

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4789..5607
-----------------
DNA (819bp)
protein (273aa)
Tax=RBG_13_OD1_Moranbacteria_45_13_curated
rifcsplowo2_12_scaffold_2302_7
Synechococcus sp. KORDI-52, Synechococcus, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

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5684..7261
-----------------
DNA (1578bp)
protein (526aa)
PhoH family protein n=1 Tax=Cyanobium gracile (strain ATCC 27147 / PCC 6307) RepID=K9P4M9_CYAGP
PhoH family protein
Uncharacterized protein {ECO:0000313|EMBL:AII49176.1}; TaxID=585425 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Synechococcus.;" source="Synechococcus sp. KORDI-52.;"
rifcsplowo2_12_scaffold_2302_8

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7343..8338
-----------------
DNA (996bp)
protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO55598.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
lipoprotein LipL45 id=5101763 bin=GWF1_WS6_37_7 species=WS6_GWF1_36_7 genus=WS6_GWF1_36_7 taxon_order=WS6_GWF1_36_7 taxon_class=WS6_GWF1_36_7 phylum=WS6 tax=GWF1_WS6_37_7 organism_group=WS6 (Doikabacteria)
rifcsplowo2_12_scaffold_2302_9
RBG_19FT_COMBO_Chloroflexi_55_16_curated, Chloroflexi, Bacteria

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8335..8982
-----------------
DNA (648bp)
protein (216aa)
hypothetical protein; K03975 membrane-associated protein Tax=RBG_19FT_COMBO_Chloroflexi_55_16_curated
Putative membrane-associated protein id=4366108 bin=GWF2_Melioribacter_38_21 species=GWA2_OP11 genus=GWA2_OP11 taxon_order=GWA2_OP11 taxon_class=GWA2_OP11 phylum=OP11 tax=GWF2_Melioribacter_38_21 organism_group=Ignavibacteria
hypothetical protein
rifcsplowo2_12_scaffold_2302_10
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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9036..9785
-----------------
DNA (750bp)
protein (250aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000380BDC3
Transcriptional regulator, TrmB {ECO:0000313|EMBL:KKR78656.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
transcriptional regulator TrmB
rifcsplowo2_12_scaffold_2302_11
Oxytricha trifallax, Oxytricha, Sporadotrichida, Stichotrichia, Eukaryota

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comp(9798..13040)
-----------------
DNA (3243bp)
protein (1081aa)
Uncharacterized protein n=1 Tax=Oxytricha trifallax RepID=J9F9L7_9SPIT
Uncharacterized protein {ECO:0000313|EMBL:EJY74896.1}; TaxID=1172189 species="Eukaryota; Alveolata; Ciliophora; Intramacronucleata; Spirotrichea; Stichotrichia; Sporadotrichida; Oxytrichidae; Oxytrich
Immunoglobulin-like repeats containing protein
rifcsplowo2_12_scaffold_2302_12
unknown

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13143..13367
-----------------
DNA (225bp)
protein (75aa)

This feature has no annotations

rifcsplowo2_12_scaffold_2302_13
Pelotomaculum thermopropionicum, Pelotomaculum, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13364..14470)
-----------------
DNA (1107bp)
protein (369aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D663_PELTS
PrsA; phosphoribosylpyrophosphate synthetase
rifcsplowo2_12_scaffold_2302_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14667..15584)
-----------------
DNA (918bp)
protein (306aa)
Transcriptional regulator, TrmB n=1 Tax=Methanococcus voltae (strain ATCC BAA-1334 / A3) RepID=D7DQW0_METV3
Putative uncharacterized protein Tax=AR19
transcriptional regulator TrmB
rifcsplowo2_12_scaffold_2302_15
unknown

Not on your lists

15665..16474
-----------------
DNA (810bp)
protein (270aa)

This feature has no annotations

rifcsplowo2_12_scaffold_2302_16
unknown

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16530..16961
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

rifcsplowo2_12_scaffold_2302_17

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17072..17827
-----------------
DNA (756bp)
protein (252aa)
Cell wall surface anchor family protein {ECO:0000313|EMBL:KHO55611.1}; TaxID=1579379 species="Archaea.;" source="archaeon GW2011_AR21.;"
rifcsplowo2_12_scaffold_2302_18
RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated, Magasanikbacteria, Parcubacteria, Bacteria

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17824..18309
-----------------
DNA (486bp)
protein (162aa)
NUDIX hydrolase Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_36_9_curated
Nudix hydrolase 3 id=2898964 bin=PER_GWC2_41_7 species=ACD76 genus=ACD76 taxon_order=ACD76 taxon_class=ACD76 phylum=OD1 tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
NUDIX hydrolase
rifcsplowo2_12_scaffold_2302_19
Pantoea stewartii, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18306..19193)
-----------------
DNA (888bp)
protein (296aa)
Putative uncharacterized protein n=1 Tax=Pantoea stewartii subsp. stewartii DC283 RepID=H3RCU8_ERWST
Uncharacterized protein {ECO:0000313|EMBL:EHU00808.1}; TaxID=660596 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea stewartii
rifcsplowo2_12_scaffold_2302_20

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19211..19795
-----------------
DNA (585bp)
protein (195aa)
30S ribosomal protein S19; K02966 small subunit ribosomal protein S19e id=5049179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S19e {ECO:0000256|HAMAP-Rule:MF_01474}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rps19E; 30S ribosomal protein S19
rifcsplowo2_12_scaffold_2302_21
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

19977..20441
-----------------
DNA (465bp)
protein (155aa)
50S ribosomal protein L31e; K02910 large subunit ribosomal protein L31e Tax=RBG_16_Micrarchaeota_49_10_curated
RPL31A; 50S ribosomal protein L31; K02910 large subunit ribosomal protein L31e id=5049181 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribosomal protein L31e
rifcsplowo2_12_scaffold_2302_22
unknown

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20446..21471
-----------------
DNA (1026bp)
protein (342aa)

This feature has no annotations

rifcsplowo2_12_scaffold_2302_23

Not on your lists

21495..22505
-----------------
DNA (1011bp)
protein (337aa)
Probable tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01081}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01081};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01081}; tRNA pseud
Probable tRNA pseudouridine synthase B n=13 Tax=Thermococcaceae RepID=TRUB_PYRFU id=5103295 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
putative tRNA pseudouridine synthase B
rifcsplowo2_12_scaffold_2302_24
R_OD1_45_26, Parcubacteria, Bacteria

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22627..22788
-----------------
DNA (162bp)
protein (54aa)
Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus sp. AR2 RepID=K0BAN5_9ARCH
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_OD1_45_26_curated
hypothetical protein
Displaying 24 items

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