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rifcsplowo2_12_scaffold_1860

Search features with annotation key words

Displaying items 1-30 of 66 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_1860_1
unknown

Not on your lists

425..679
DNA (255bp) protein (85aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_2
unknown

Not on your lists

785..991
DNA (207bp) protein (69aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_3
unknown

Not on your lists

1035..1283
DNA (249bp) protein (83aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_4
unknown

Not on your lists

1290..1523
DNA (234bp) protein (78aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_5
unknown

Not on your lists

1567..1881
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_6
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

1997..2317
DNA (321bp) protein (107aa)
RNA-binding protein Tax=CG_Pacearch_04
RNA-binding protein RNP-2 id=15188550 bin=GWF2_WS6 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=GWF2_WS6 organism_group=WS6 (Doikabacteria) organism_desc=Complete genome
rpbA; putative RNA-binding protein RbpA
rifcsplowo2_12_scaffold_1860_7
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

2455..2793
DNA (339bp) protein (113aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Z1L9_9BACT
Export-related chaperone CsaA Tax=GWA1_Berkelbacteria_36_10
export-related chaperone CsaA
rifcsplowo2_12_scaffold_1860_8
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

2834..3235
DNA (402bp) protein (134aa)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Pontibacter sp. BAB1700 RepID=J0V5W3_9BACT id=5103583 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Peptide methionine sulfoxide reductase msrB Tax=CG_Pacearch_03
Peptide methionine sulfoxide reductase MsrB
rifcsplowo2_12_scaffold_1860_9
Nitrolancea hollandica, Nitrolancea, Sphaerobacterales, Sphaerobacteridae, Chloroflexi, Bacteria

Not on your lists

comp(3295..3492)
DNA (198bp) protein (66aa)
Uncharacterized protein n=1 Tax=Nitrolancetus hollandicus Lb RepID=I4EJE0_9CHLR
Uncharacterized protein {ECO:0000313|EMBL:CCF84802.1}; TaxID=1129897 species="Bacteria; Chloroflexi; Sphaerobacteridae; Sphaerobacterales; Sphaerobacterineae; Sphaerobacteraceae; Nitrolancea.;" source
hypothetical protein
rifcsplowo2_12_scaffold_1860_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4080..4346
DNA (267bp) protein (89aa)
prostaglandin E synthase, putative; K05309 microsomal prostaglandin-E synthase 2 [EC:5.3.99.3] Tax=AR11
rifcsplowo2_12_scaffold_1860_11
unknown

Not on your lists

4402..4875
DNA (474bp) protein (158aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_12
Pseudanabaena sp. PCC 7367, Pseudanabaena, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

4981..5502
DNA (522bp) protein (174aa)
Peroxiredoxin n=1 Tax=Leptolyngbya sp. PCC 6406 RepID=L8LIV1_9CYAN
Redoxin domain-containing protein
Redoxin domain protein {ECO:0000313|EMBL:AFY70635.1}; TaxID=82654 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Pseudanabaena.;" source="Pseudanabaena sp. PCC 7367.;"
rifcsplowo2_12_scaffold_1860_13
R_RIF_OD1_06_34_9, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(5515..6171)
DNA (657bp) protein (219aa)
SAM-dependent methyltransferase n=2 Tax=Methanosarcina mazei RepID=M1PZB3_METMZ
type 11 methyltransferase Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_06_34_9_curated
SAM-dependent methyltransferase
rifcsplowo2_12_scaffold_1860_14
unknown

Not on your lists

6288..6452
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_15

Not on your lists

comp(6517..6705)
DNA (189bp) protein (63aa)
Marine sediment metagenome DNA, contig: S12H4_L04936 {ECO:0000313|EMBL:GAI82028.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_12_scaffold_1860_16

Not on your lists

comp(6707..8218)
DNA (1512bp) protein (504aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00177}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00177};; Lysyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00177}; TaxID=1579376 species="Archaea.;" source=
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000365A573
lysyl-tRNA synthetase
rifcsplowo2_12_scaffold_1860_17
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(8253..8654)
DNA (402bp) protein (134aa)
ribonuclease H Tax=RBG_13_Pacearchaeota_33_26_curated
ribonuclease H id=5044082 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
ribonuclease H
rifcsplowo2_12_scaffold_1860_18
unknown

Not on your lists

8705..9067
DNA (363bp) protein (121aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_19
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9073..9348)
DNA (276bp) protein (92aa)
acylphosphatase; K01512 acylphosphatase [EC:3.6.1.7] Tax=RBG_16_Pacearchaeota_35_8_curated
Acylphosphatase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GYF7_METFV
acylphosphatase
rifcsplowo2_12_scaffold_1860_20
unknown

Not on your lists

9429..9716
DNA (288bp) protein (96aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_21
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(9722..9973)
DNA (252bp) protein (84aa)
hypothetical protein Tax=CG_Pacearch_04
Putative uncharacterized protein id=5045885 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_12_scaffold_1860_22
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9975..10667)
DNA (693bp) protein (231aa)
Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsplowo2_12_scaffold_1860_23
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(11013..11609)
DNA (597bp) protein (199aa)
RNA base methyltransferase family enzyme n=1 Tax=nanoarchaeote Nst1 RepID=R1FT05_9ARCH id=5103444 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=RBG_13_Pacearchaeota_33_26_curated
RNA base methyltransferase family enzyme
rifcsplowo2_12_scaffold_1860_24
unknown

Not on your lists

11660..11974
DNA (315bp) protein (105aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_25
unknown

Not on your lists

12008..12409
DNA (402bp) protein (134aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1860_26
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(12410..13297)
DNA (888bp) protein (296aa)
pseudouridylate synthase TruB domain protein; K11131 H/ACA ribonucleoprotein complex subunit 4 [EC:5.4.99.-] Tax=AR19
Probable tRNA pseudouridine synthase B n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=D3TB21_ACIB4
pseudouridylate synthase TruB domain protein
rifcsplowo2_12_scaffold_1860_27
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(13397..13840)
DNA (444bp) protein (148aa)
DoxX family protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8J745_HALJB
conserved membrane protein of unknown function Tax=CG_Pacearch_06
DoxX family protein
rifcsplowo2_12_scaffold_1860_28
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

13902..14519
DNA (618bp) protein (206aa)
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=RBG_16_Pacearchaeota_35_8_curated
Base excision DNA repair protein, HhH-GPD family n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IE81_ACIB4 id=5103570 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Base excision DNA repair protein, HhH-GPD family
rifcsplowo2_12_scaffold_1860_29
Haloferax mediterranei, Haloferax, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

14516..15031
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Haloferax mediterranei (strain ATCC 33500 / DSM 1411 / JCM 8866 / NBRC 14739 / NCIMB 2177 / R-4) RepID=I3R917_HALMT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFK20727.1}; TaxID=523841 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Haloferax.;" source="Haloferax mediterranei (strain AT
rifcsplowo2_12_scaffold_1860_30

Not on your lists

15134..15766
DNA (633bp) protein (211aa)
N-glycosylase/DNA lyase (EC:4.2.99.18)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZLE7_9BACT
Probable N-glycosylase/DNA lyase {ECO:0000256|HAMAP-Rule:MF_00241}; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Displaying items 1-30 of 66 in total

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