ggKbase home page

rifcsplowo2_12_scaffold_678

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_678_1
unknown

Not on your lists

1..645
DNA (645bp) protein (215aa)

This feature has no annotations

rifcsplowo2_12_scaffold_678_2
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

642..1670
DNA (1029bp) protein (343aa)
Polymorphic outer membrane protein n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RD42_METP4
polymorphic outer membrane protein Tax=RBG_16_Pacearchaeota_35_8_curated
polymorphic outer membrane protein
rifcsplowo2_12_scaffold_678_3
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

1897..3126
DNA (1230bp) protein (410aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
DNA and RNA helicase Tax=CG_Pacearch_05
PHP protein
rifcsplowo2_12_scaffold_678_4
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3311..3730)
DNA (420bp) protein (140aa)
hypothetical protein
id=5103499 Tax=RBG_16_Pacearchaeota_35_8_curated
id=5103499 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_12_scaffold_678_5
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3802..4518)
DNA (717bp) protein (239aa)
Translation initiation factor 2 subunit alpha
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 Tax=RBG_13_Pacearchaeota_33_26_curated
eif2A; translation initiation factor IF-2 subunit alpha; K03237 translation initiation factor 2 subunit 1 id=5050676 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_12_scaffold_678_6

Not on your lists

comp(4596..4973)
DNA (378bp) protein (126aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51731.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifcsplowo2_12_scaffold_678_7
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

5048..5839
DNA (792bp) protein (264aa)
ATP-binding protein Tax=CG_Pacearch_01
cell division inhibitor; K03609 septum site-determining protein MinD id=5045746 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
cell division inhibitor minD - like protein
rifcsplowo2_12_scaffold_678_8
Chitinivibrio alkaliphilus, Chitinivibrio, Chitinivibrionales, Chitinivibrionia, Fibrobacteres, Bacteria

Not on your lists

5884..6618
DNA (735bp) protein (245aa)
Uncharacterized protein n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7DAR3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:ERP32217.1}; TaxID=1313304 species="Bacteria; Fibrobacteres; Chitinivibrionia; Chitinivibrionales; Chitinivibrionaceae; Chitinivibrio.;" source="Chitinivibrio
rifcsplowo2_12_scaffold_678_trna_7
unknown

Not on your lists

comp(6707..6779)
DNA (73bp)
transferRNA
rifcsplowo2_12_scaffold_678_9

Not on your lists

comp(6803..7180)
DNA (378bp) protein (126aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037AA799
Marine sediment metagenome DNA, contig: S01H1_S08294 {ECO:0000313|EMBL:GAG07237.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hypothetical protein
rifcsplowo2_12_scaffold_678_10

Not on your lists

comp(7316..7939)
DNA (624bp) protein (208aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037BC5F7
Uncharacterized protein {ECO:0000313|EMBL:KKK79956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsplowo2_12_scaffold_678_11

Not on your lists

comp(7936..8349)
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK79957.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
vitamin K epoxide reductase id=133768 bin=ACD81 species=ACD81 genus=ACD81 taxon_order=ACD81 taxon_class=ACD81 phylum=OD1 tax=ACD81 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsplowo2_12_scaffold_678_12
unknown

Not on your lists

8418..8654
DNA (237bp) protein (79aa)

This feature has no annotations

rifcsplowo2_12_scaffold_678_13
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists


comp(8644..10026)
DNA (1383bp) protein (461aa)
SRP54-type protein, GTPase domain n=1 Tax=sediment metagenome RepID=D9PEV7_9ZZZZ
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 Tax=RBG_13_Pacearchaeota_33_26_curated
SRP54-type protein, GTPase protein
rifcsplowo2_12_scaffold_678_14
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10101..11255
DNA (1155bp) protein (385aa)
Major facilitator superfamily MFS_1 n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ALL5_METOI
major facilitator superfamily protein Tax=RBG_13_Pacearchaeota_33_26_curated
major facilitator superfamily protein
rifcsplowo2_12_scaffold_678_15

Not on your lists

comp(11499..12632)
DNA (1134bp) protein (378aa)
Signal recognition particle GTPase n=1 Tax=sediment metagenome RepID=D9PEV9_9ZZZZ
Signal recognition particle GTPase {ECO:0000313|EMBL:EFK97895.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
Signal recognition particle GTPase
rifcsplowo2_12_scaffold_678_16
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

12787..14010
DNA (1224bp) protein (408aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=RBG_13_Pacearchaeota_33_26_curated
cofactor-independent phosphoglycerate mutase (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (Phosphoglyceromutase) n=1 Tax=sediment metagenome RepID=D9PEW1_9ZZZZ
rifcsplowo2_12_scaffold_678_17
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

14030..14575
DNA (546bp) protein (182aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PEW2_9ZZZZ
Putative uncharacterized protein Tax=RBG_16_Pacearchaeota_35_8_curated
rifcsplowo2_12_scaffold_678_18
GWC2_OD1_37_14, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(14579..14833)
DNA (255bp) protein (85aa)
Putative uncharacterized protein Tax=GWC2_OD1_37_14
rifcsplowo2_12_scaffold_678_19
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

comp(14835..15221)
DNA (387bp) protein (129aa)
mutator MutT protein Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
NUDIX hydrolase id=2239475 bin=GWA2_Elusi-like_A8_64_40 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=GWA2_Elusi-like_A8_64_40 organism_group=Elusimicrobia
mutator MutT protein
rifcsplowo2_12_scaffold_678_trna_6
unknown

Not on your lists

comp(15367..15456)
DNA (90bp)
transferRNA
rifcsplowo2_12_scaffold_678_20

Not on your lists

comp(15652..16419)
DNA (768bp) protein (256aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO48555.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
id=5049653 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_12_scaffold_678_21

Not on your lists


comp(16444..16986)
DNA (543bp) protein (181aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738263
Marine sediment metagenome DNA, contig: S03H2_S23408 {ECO:0000313|EMBL:GAH85563.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S3Ae
rifcsplowo2_12_scaffold_678_22
unknown

Not on your lists

comp(16977..17171)
DNA (195bp) protein (65aa)

This feature has no annotations

rifcsplowo2_12_scaffold_678_23
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(17111..17422)
DNA (312bp) protein (104aa)
LSU ribosomal protein L44E
id=5050681 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR13
rifcsplowo2_12_scaffold_678_trna_5
unknown

Not on your lists

comp(17499..17570)
DNA (72bp)
transferRNA
rifcsplowo2_12_scaffold_678_24
unknown

Not on your lists

17624..17839
DNA (216bp) protein (72aa)

This feature has no annotations

rifcsplowo2_12_scaffold_678_25
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

17882..19759
DNA (1878bp) protein (626aa)
hypothetical protein
id=5103088 Tax=RBG_13_Pacearchaeota_33_26_curated
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_12_scaffold_678_26

Not on your lists

19756..26118
DNA (6363bp) protein (2121aa)
Lytic murein transglycosylase n=1 Tax=Melioribacter roseus (strain P3M) RepID=I6Z887_MELRP id=5103087 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Lytic murein transglycosylase
Uncharacterized protein {ECO:0000313|EMBL:KHO48590.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
rifcsplowo2_12_scaffold_678_trna_4
unknown

Not on your lists

comp(26260..26343)
DNA (84bp)
transferRNA
Displaying items 1-30 of 56 in total

View Taxonomy