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rifcsplowo2_12_scaffold_4131

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_4131_1
unknown

Not on your lists

1..1680
-----------------
DNA (1680bp)
protein (560aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_2
unknown

Not on your lists

comp(1701..2582)
-----------------
DNA (882bp)
protein (294aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_3
unknown

Not on your lists

comp(2622..3476)
-----------------
DNA (855bp)
protein (285aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_4
unknown

Not on your lists

comp(3489..4523)
-----------------
DNA (1035bp)
protein (345aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_5
unknown

Not on your lists

comp(4542..5093)
-----------------
DNA (552bp)
protein (184aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_6
RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5189..5533
-----------------
DNA (345bp)
protein (115aa)
Tetratricopeptide repeat-containing protein n=1 Tax=Brachyspira pilosicoli P43/6/78 RepID=L0EYM9_BRAPL
peptidase C14 caspase catalytic subunit p20 Tax=RBG_19FT_COMBO_Deltaproteobacteria_52_11_curated
hypothetical protein
rifcsplowo2_12_scaffold_4131_7
unknown

Not on your lists

5550..5795
-----------------
DNA (246bp)
protein (82aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_8
unknown

Not on your lists

5792..11326
-----------------
DNA (5535bp)
protein (1845aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_9
unknown

Not on your lists

comp(11316..11705)
-----------------
DNA (390bp)
protein (130aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_10
unknown

Not on your lists

12083..13237
-----------------
DNA (1155bp)
protein (385aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_11
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(13421..13702)
-----------------
DNA (282bp)
protein (94aa)
MarR family transcriptional regulator Tax=CG_Micra_05
rifcsplowo2_12_scaffold_4131_12
BJP_IG2103_Methanoregula_55_19, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

13862..14077
-----------------
DNA (216bp)
protein (72aa)
Uncharacterized protein n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJA4_METFS
hypothetical protein
Tax=BJP_IG2103_Methanoregula_55_19
rifcsplowo2_12_scaffold_4131_13
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists


14234..14623
-----------------
DNA (390bp)
protein (130aa)
30S ribosomal protein S6e n=1 Tax=Methanoculleus marisnigri (strain ATCC 35101 / DSM 1498 / JR1) RepID=RS6E_METMJ
SSU ribosomal protein s6e; K02991 small subunit ribosomal protein S6e Tax=CG_Micra_05
30S ribosomal protein S6
rifcsplowo2_12_scaffold_4131_14
Methanothermococcus okinawensis, Methanothermococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists


14821..16011
-----------------
DNA (1191bp)
protein (397aa)
Translation initiation factor 2 subunit gamma n=1 Tax=Methanothermococcus okinawensis (strain DSM 14208 / JCM 11175 / IH1) RepID=F8ANQ3_METOI
translation initiation factor 2 subunit gamma
Translation initiation factor 2 subunit gamma {ECO:0000256|HAMAP-Rule:MF_00119}; aIF2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; eIF-2-gamma {ECO:0000256|HAMAP-Rule:MF_00119}; TaxID=647113 species="Arch
rifcsplowo2_12_scaffold_4131_trna_1
unknown

Not on your lists

comp(16018..16101)
-----------------
DNA (84bp)
transferRNA
rifcsplowo2_12_scaffold_4131_15
unknown

Not on your lists

16232..16450
-----------------
DNA (219bp)
protein (73aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_16
RIFOXYB2_FULL_WOR_1_37_13_curated, WOR-1, Bacteria

Not on your lists

comp(16447..17070)
-----------------
DNA (624bp)
protein (208aa)
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI00035FC99F
beta-lactamase domain-containing protein Tax=RIFOXYB2_FULL_WOR_1_37_13_curated
metallo-beta-lactamase family protein
rifcsplowo2_12_scaffold_4131_17
R_RIF_OD1_05_43_15b, RIF-OD1-5, Parcubacteria, Bacteria

Not on your lists

comp(17067..17678)
-----------------
DNA (612bp)
protein (204aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] Tax=RIFCSPHIGHO2_02_FULL_RIF_OD1_05_43_15b_curated
Metal dependent phosphohydrolase n=1 Tax=Frankia sp. CN3 RepID=G6HB45_9ACTO
metal dependent phosphohydrolase
rifcsplowo2_12_scaffold_4131_18
Geobacillus stearothermophilus, Geobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17680..19254)
-----------------
DNA (1575bp)
protein (525aa)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00733}; Short=P5C dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00733};; EC=1.2.1.88 {ECO:0000256|HAMAP-Rule:MF_00733};; L-glutamate gamma
1-pyrroline-5-carboxylate dehydrogenase 1 (EC:1.2.1.88)
1-pyrroline-5-carboxylate dehydrogenase n=2 Tax=Brevibacillus laterosporus RepID=F7TT66_BRELA
rifcsplowo2_12_scaffold_4131_19
unknown

Not on your lists

comp(19264..20598)
-----------------
DNA (1335bp)
protein (445aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_20
unknown

Not on your lists

20889..22061
-----------------
DNA (1173bp)
protein (391aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_21
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

comp(22050..23225)
-----------------
DNA (1176bp)
protein (392aa)
ORC complex protein Cdc6/Orc1; K10725 archaeal cell division control protein 6 Tax=CG_Micra_05
cdc6; archaeal cell division control protein 6
cdc6; cell division control protein 6; K10725 archaeal cell division control protein 6 id=5241429 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_12_scaffold_4131_22
unknown

Not on your lists

23364..24155
-----------------
DNA (792bp)
protein (264aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_23
CG_Micra_01, Micraarchaeota, Archaea

Not on your lists

24341..24565
-----------------
DNA (225bp)
protein (75aa)
Putative uncharacterized protein n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DHA2_9EURY
hypothetical protein Tax=CG_Micra_01
rifcsplowo2_12_scaffold_4131_24
unknown

Not on your lists

24767..24955
-----------------
DNA (189bp)
protein (63aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4131_25
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

Not on your lists

comp(24900..25469)
-----------------
DNA (570bp)
protein (190aa)
UPF0218 protein Metvu_1473 n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RIC4_METVM
hypothetical protein
UPF0218 protein Metvu_1473 {ECO:0000256|HAMAP-Rule:MF_00590}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanoc
rifcsplowo2_12_scaffold_4131_26
CG_Anaero_04, Anaerolineales, Anaerolineae, Chloroflexi, Bacteria

Not on your lists

25480..25758
-----------------
DNA (279bp)
protein (93aa)
major facilitator superfamily transporter Tax=CG_Anaero_04
Major facilitator superfamily permease id=4815811 bin=GWA2_Elusi_like_61_42 species=PER_GWF2_39_17 genus=PER_GWF2_39_17 taxon_order=PER_GWF2_39_17 taxon_class=PER_GWF2_39_17 phylum=PER tax=GWA2_Elusi_like_61_42 organism_group=Elusimicrobia organism_desc=Possibly not Elusi
major facilitator superfamily protein
Displaying 27 items

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