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rifcsplowo2_12_scaffold_3344

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_3344_1
unknown

Not on your lists

232..603
-----------------
DNA (372bp)
protein (124aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_2
unknown

Not on your lists

comp(644..1219)
-----------------
DNA (576bp)
protein (192aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_3
unknown

Not on your lists

1297..1722
-----------------
DNA (426bp)
protein (142aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_4

Not on your lists

comp(1781..3025)
-----------------
DNA (1245bp)
protein (415aa)
ATPase n=1 Tax=Thermofilum sp. 1910b RepID=S5ZNB2_9CREN
Putative ATPase {ECO:0000313|EMBL:CEG12154.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
ATPase
rifcsplowo2_12_scaffold_3344_5
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(3147..4190)
-----------------
DNA (1044bp)
protein (348aa)
thioredoxin reductase; K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] Tax=AR6
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin reductase TrxB-3
rifcsplowo2_12_scaffold_3344_6
GWA2_OD1_45_90, Azambacteria, Parcubacteria, Bacteria

Not on your lists

comp(4203..4409)
-----------------
DNA (207bp)
protein (69aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU19516.1}; TaxID=1618614 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Azambacteria) bacterium GW2011_GWA2_45_90.;"
transmembrane_regions 5..25 id=98813 bin=ACD66 species=ACD66 genus=ACD66 taxon_order=ACD66 taxon_class=ACD66 phylum=OD1 tax=ACD66 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsplowo2_12_scaffold_3344_7

Not on your lists

comp(4433..4675)
-----------------
DNA (243bp)
protein (81aa)
YruB family glutaredoxin n=1 Tax=Acetivibrio cellulolyticus RepID=UPI0001E2D10C
Marine sediment metagenome DNA, contig: S12H4_S02227 {ECO:0000313|EMBL:GAI93152.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
glutaredoxin-like protein
rifcsplowo2_12_scaffold_3344_8
unknown

Not on your lists

4815..5522
-----------------
DNA (708bp)
protein (236aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_9
unknown

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comp(5519..6757)
-----------------
DNA (1239bp)
protein (413aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_10
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6777..8117
-----------------
DNA (1341bp)
protein (447aa)
Aminotransferase, class III; probable 4-aminobutyrate aminotransferase n=1 Tax=Bacillus megaterium WSH-002 RepID=G2RJU2_BACME rbh
aminotransferase
Aminotransferase, class III probable 4-aminobutyrate aminotransferase {ECO:0000313|EMBL:AEN88038.1}; TaxID=1006007 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="
rifcsplowo2_12_scaffold_3344_11

Not on your lists

comp(8125..8499)
-----------------
DNA (375bp)
protein (125aa)
hypothetical protein
PIN domain-like id=5241235 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF60226.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_12_scaffold_3344_12
unknown

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comp(8516..8746)
-----------------
DNA (231bp)
protein (77aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_13
Cyanothece sp. PCC 7425, Cyanothece, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

8822..10030
-----------------
DNA (1209bp)
protein (403aa)
Saccharopine dehydrogenase n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) RepID=B8HS96_CYAP4
saccharopine dehydrogenase
Saccharopine dehydrogenase {ECO:0000313|EMBL:ACL44202.1}; TaxID=395961 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanothece.;" source="Cyanothece sp. (strain PCC 7425 / A
rifcsplowo2_12_scaffold_3344_14
RBG_16_Acidobacteria_70_10_curated, Acidobacteria, Bacteria

Not on your lists

10021..11679
-----------------
DNA (1659bp)
protein (553aa)
Putrescine aminotransferase; K09251 putrescine aminotransferase [EC:2.6.1.82] Tax=RBG_16_Acidobacteria_70_10_curated
Aminotransferase class-III family protein n=1 Tax=Desulfovibrio sp. A2 RepID=G2H507_9DELT rbh
Putrescine aminotransferase
rifcsplowo2_12_scaffold_3344_15
unknown

Not on your lists

comp(11680..13278)
-----------------
DNA (1599bp)
protein (533aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_16
unknown

Not on your lists

13440..13907
-----------------
DNA (468bp)
protein (156aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_17
unknown

Not on your lists

comp(13908..14147)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_18
R_PER_ii_49_16, PER-ii, Bacteria

Not on your lists

comp(14160..15656)
-----------------
DNA (1497bp)
protein (499aa)
aldehyde dehydrogenase; K00130 betaine-aldehyde dehydrogenase [EC:1.2.1.8] Tax=RIFCSPHIGHO2_02_FULL_PER_ii_49_16_curated
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI000365F297 rbh
hypothetical protein
rifcsplowo2_12_scaffold_3344_19
unknown

Not on your lists

comp(15949..16689)
-----------------
DNA (741bp)
protein (247aa)

This feature has no annotations

rifcsplowo2_12_scaffold_3344_20
R_OP11_Roizmanbacteria_39_24, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

comp(16827..17858)
-----------------
DNA (1032bp)
protein (344aa)
Tax=RIFCSPHIGHO2_01_FULL_OP11_Roizmanbacteria_39_24_curated
rifcsplowo2_12_scaffold_3344_21
RifOxyB12_full_OP3_50_7_curated, Omnitrophica, Bacteria

Not on your lists

17913..18863
-----------------
DNA (951bp)
protein (317aa)
ndh_[C]; FAD-dependent pyridine nucleotide-disulfide oxidoreductase Tax=RifOxyB12_full_OP3_50_7_curated
Putative FAD-dependent pyridine nucleotide-disulphide oxidoreductase id=4205937 bin=GWA2_Elusimicrobia_69_24 species=RBG9 genus=RBG9 taxon_order=RBG9 taxon_class=RBG9 phylum=Chloroflexi tax=GWA2_Elusimicrobia_69_24 organism_group=Elusimicrobia
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Displaying 21 items

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