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rifcsplowo2_12_scaffold_1372

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_1372_1
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(2..460)
-----------------
DNA (459bp)
protein (153aa)
hypothetical protein Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
hypothetical protein id=5049638 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsplowo2_12_scaffold_1372_2
RIFOXYC2_FULL_WOR_1_41_25_curated, WOR-1, Bacteria

Not on your lists

comp(486..3110)
-----------------
DNA (2625bp)
protein (875aa)
heavy-metal transporting P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFOXYC2_FULL_WOR_1_41_25_curated
Cu2+-exporting ATPase (EC:3.6.3.4)
Heavy-metal transporting P-type ATPase id=5800398 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_12_scaffold_1372_3
R_OD1_Uhrbacteria_47_17, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

comp(3132..3332)
-----------------
DNA (201bp)
protein (67aa)
transmembrane_regions Tax=RIFCSPLOWO2_01_FULL_OD1_Uhrbacteria_47_17_curated
transmembrane_regions id=5044093 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_12_scaffold_1372_4
uncultured Candidatus Nitrosocaldus sp., Candidatus Nitrosocaldus, Crenarchaeota, Archaea

Not on your lists

comp(3372..3878)
-----------------
DNA (507bp)
protein (169aa)
Uncharacterized protein id=4010368 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Putative uncharacterized protein HGP-15 {ECO:0000313|EMBL:BAE95215.1}; TaxID=766501 species="Archaea; Crenarchaeota; Candidatus Nitrosocaldus; environmental samples.;" source="uncultured Candidatus Ni
exported protein of unknown function
rifcsplowo2_12_scaffold_1372_5

Not on your lists

comp(4077..4895)
-----------------
DNA (819bp)
protein (273aa)
glucose 1-dehydrogenase (EC:1.1.1.47)
short-chain dehydrogenase n=1 Tax=Coprothermobacter platensis RepID=UPI000382B680
Glucose 1-dehydrogenase II {ECO:0000313|EMBL:KHO53735.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_12_scaffold_1372_6
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4852..5286)
-----------------
DNA (435bp)
protein (145aa)
PROKAR_LIPOPROTEIN id=5800408 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=AR9
rifcsplowo2_12_scaffold_1372_7
AR9, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5276..5698)
-----------------
DNA (423bp)
protein (141aa)
hypothetical protein
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsplowo2_12_scaffold_1372_8
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5810..6127)
-----------------
DNA (318bp)
protein (106aa)
OsmC family protein id=5041601 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
OsmC family protein Tax=AR4
redox protein, regulator of disulfide bond formation
rifcsplowo2_12_scaffold_1372_9

Not on your lists

comp(6322..6942)
-----------------
DNA (621bp)
protein (207aa)
Methyltransferase family protein n=1 Tax=Chryseobacterium sp. CF314 RepID=J2K853_9FLAO
Type 12 methyltransferase {ECO:0000313|EMBL:KHO49673.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
type 12 methyltransferase
rifcsplowo2_12_scaffold_1372_10
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(6955..7494)
-----------------
DNA (540bp)
protein (180aa)
hypothetical protein Tax=AR19
hypothetical protein id=5041717 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsplowo2_12_scaffold_1372_11

Not on your lists

7583..8053
-----------------
DNA (471bp)
protein (157aa)
PadR-like protein family transcriptional regulator
PadR-like family transcriptional regulator id=5240645 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PadR-like protein family transcriptional regulator {ECO:0000313|EMBL:AJF59638.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_12_scaffold_1372_12
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(8221..8649)
-----------------
DNA (429bp)
protein (143aa)
Rhodanese domain protein id=5800412 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Rhodanese domain-containing protein
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsplowo2_12_scaffold_1372_13

Not on your lists

comp(8699..9202)
-----------------
DNA (504bp)
protein (168aa)
hypothetical protein
Putative uncharacterized protein id=5041716 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47968.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_12_scaffold_1372_14
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9204..9728)
-----------------
DNA (525bp)
protein (175aa)
hypothetical protein
seg id=5041715 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
seg Tax=AR4
rifcsplowo2_12_scaffold_1372_15
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(9748..10254)
-----------------
DNA (507bp)
protein (169aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E987E
hypothetical protein Tax=CG_Pacearch_06
CopG family transcriptional regulator
rifcsplowo2_12_scaffold_1372_16
unknown

Not on your lists

comp(10226..10423)
-----------------
DNA (198bp)
protein (66aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1372_17

Not on your lists

comp(10425..10679)
-----------------
DNA (255bp)
protein (85aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036F4839
Uncharacterized protein {ECO:0000313|EMBL:KHO49263.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
rifcsplowo2_12_scaffold_1372_18
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(10681..11355)
-----------------
DNA (675bp)
protein (225aa)
hypothetical protein
id=5103492 Tax=CG_Pacearch_02
id=5103492 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsplowo2_12_scaffold_1372_19
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(11481..12023)
-----------------
DNA (543bp)
protein (181aa)
hypothetical protein Tax=CG_Woesearch_03
hypothetical protein
MarR family transcriptional regulator id=5041916 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_1372_20
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12066..12521)
-----------------
DNA (456bp)
protein (152aa)
Uncharacterised protein family YphA id=5041721 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterised protein family YphA Tax=AR4
rifcsplowo2_12_scaffold_1372_21
GWC2_OP11_ACD12-rel_34_23, Roizmanbacteria, Microgenomates, Bacteria

Not on your lists

comp(12569..12946)
-----------------
DNA (378bp)
protein (126aa)
Cytochrome c oxidase subunit II {ECO:0000313|EMBL:KKP61604.1}; TaxID=1618484 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWC2_34_23.;"
Cytochrome c oxidase subunit II id=4281983 bin=GWF2_OP3_43_52 species=Ilyobacter polytropus genus=Ilyobacter taxon_order=Fusobacteriales taxon_class=Fusobacteriia phylum=Fusobacteria tax=GWF2_OP3_43_52 organism_group=OP3 (Omnitrophica) organism_desc=Same as C2_44_8
cytochrome c oxidase subunit II
rifcsplowo2_12_scaffold_1372_22

Not on your lists

comp(12958..13386)
-----------------
DNA (429bp)
protein (143aa)
hypothetical protein
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47965.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_12_scaffold_1372_23
R_OP11_Levybacteria_42_15, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(13388..14146)
-----------------
DNA (759bp)
protein (253aa)
Putative uncharacterized protein HGP-15 n=1 Tax=uncultured Candidatus Nitrosocaldus sp. RepID=Q1ERB1_9CREN
id=5103496 Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_42_15_curated
exported protein of unknown function
rifcsplowo2_12_scaffold_1372_24
unknown

Not on your lists

comp(14150..14623)
-----------------
DNA (474bp)
protein (158aa)

This feature has no annotations

rifcsplowo2_12_scaffold_1372_25
CG_Levy_01, Levybacteria, Microgenomates, Bacteria

Not on your lists

comp(14639..15757)
-----------------
DNA (1119bp)
protein (373aa)
hypothetical protein
transmembrane_regions 21..43 Tax=CG_Levy_01
id=5087253 bin=GWF1_OP11_31_35_complete species=OP11_1 genus=OP11_1 taxon_order=OP11_1 taxon_class=OP11_1 phylum=OP11 tax=GWF1_OP11_31_35_complete organism_group=OP11 (Microgenomates) organism_desc=Complete genome (was OP11_1)
rifcsplowo2_12_scaffold_1372_26
PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, PER_GWC2_41_7, Peregrinibacteria, Bacteria

Not on your lists

comp(15778..15987)
-----------------
DNA (210bp)
protein (70aa)
id=4010371 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
id=4010371 bin=PER_GWC2_41_7 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsplowo2_12_scaffold_1372_27
GWB2_WWE3_43_22_part, WWE3, Bacteria

Not on your lists

comp(16006..17244)
-----------------
DNA (1239bp)
protein (413aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KKT11694.1}; TaxID=1619118 species="Bacteria; candidate division WWE3.;" source="candidate division WWE3 bacterium GW2011_GWB2_43_22.;"
id=5049635 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
rifcsplowo2_12_scaffold_1372_28
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17437..18204)
-----------------
DNA (768bp)
protein (256aa)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Geobacter daltonii (strain DSM 22248 / JCM 15807 / FRC-32) RepID=B9M3G4_GEODF
Prolipoprotein diacylglyceryl transferase Tax=AR11
prolipoprotein diacylglyceryl transferase
rifcsplowo2_12_scaffold_1372_29
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(18220..19008)
-----------------
DNA (789bp)
protein (263aa)
hypothetical protein Tax=AR11
rifcsplowo2_12_scaffold_1372_30
R_RIF_OD1_06_38_12, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(19096..20211)
-----------------
DNA (1116bp)
protein (372aa)
Putative outer membrane protein n=1 Tax=gamma proteobacterium HTCC2207 RepID=Q1YTS6_9GAMM
YadA domain-containing protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_06_38_12_curated
hypothetical protein
Displaying items 1-30 of 63 in total

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