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rifcsplowo2_12_scaffold_4436

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_4436_1
CG_Woesearch_02, Woesearchaeota, Archaea

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1..1005
-----------------
DNA (1005bp)
protein (335aa)
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12); K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=CG_Woesearch_02
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5043742 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
aspS; aspartyl-tRNA synthetase (EC:6.1.1.12)
rifcsplowo2_12_scaffold_4436_2
unknown

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1015..1401
-----------------
DNA (387bp)
protein (129aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4436_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(1432..1842)
-----------------
DNA (411bp)
protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003707988
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_12_scaffold_4436_4
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(1843..2433)
-----------------
DNA (591bp)
protein (197aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003816AF2
hypothetical protein
hypothetical protein Tax=CG_Woesearch_01
rifcsplowo2_12_scaffold_4436_5
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

Not on your lists

comp(2613..2948)
-----------------
DNA (336bp)
protein (112aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70041.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
hypothetical protein id=18248134 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsplowo2_12_scaffold_4436_6
RBG_13_OD1_Falkowbacteria_39_9_curated, Falkowbacteria, Parcubacteria, Bacteria

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comp(2945..3811)
-----------------
DNA (867bp)
protein (289aa)
Tax=RBG_13_OD1_Falkowbacteria_39_9_curated
rifcsplowo2_12_scaffold_4436_7
Parcubacteria bacterium GW2011_GWA1_42_7, Parcubacteria, Bacteria

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3966..4259
-----------------
DNA (294bp)
protein (98aa)
Uncharacterized protein {ECO:0000313|EMBL:KKS70040.1}; TaxID=1618785 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA1_42_7.;"
hypothetical protein id=18248133 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
hypothetical protein
rifcsplowo2_12_scaffold_4436_8
unknown

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4302..4910
-----------------
DNA (609bp)
protein (203aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4436_9

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5199..5771
-----------------
DNA (573bp)
protein (191aa)
DITP/XTP pyrophosphatase {ECO:0000313|EMBL:KHO51307.1}; EC=3.6.1.19 {ECO:0000313|EMBL:KHO51307.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GZH4_METFV
rifcsplowo2_12_scaffold_4436_10
AR11, Woesearchaeaota, DPANN, Archaea

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5773..6351
-----------------
DNA (579bp)
protein (193aa)
id=5045972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsplowo2_12_scaffold_4436_11

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6528..6812
-----------------
DNA (285bp)
protein (95aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
gatC; aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit C (EC:6.3.5.6)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C id=5799877 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_12_scaffold_4436_12

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6814..7377
-----------------
DNA (564bp)
protein (188aa)
hypothetical protein id=13010 bin=ACD18 species=ACD18 genus=ACD18 taxon_order=ACD18 taxon_class=ACD18 phylum=OD1 tax=ACD18 organism_group=OD1 (Parcubacteria) organism_desc= OD1
Uncharacterized protein {ECO:0000313|EMBL:EKE06880.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Major facilitator superfamily MFS_1
rifcsplowo2_12_scaffold_4436_13

Not on your lists

7384..8811
-----------------
DNA (1428bp)
protein (476aa)
Aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A {ECO:0000313|EMBL:KHO51304.1}; EC=6.3.5.6 {ECO:0000313|EMBL:KHO51304.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit A (EC:6.3.5.6)
Glutamyl-tRNA(Gln) amidotransferase subunit A id=5799876 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_12_scaffold_4436_14

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comp(8859..9230)
-----------------
DNA (372bp)
protein (124aa)
hypothetical protein id=5043583 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46559.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsplowo2_12_scaffold_4436_15

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9336..9641
-----------------
DNA (306bp)
protein (102aa)
seg id=5043584 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46560.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_12_scaffold_4436_16

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9726..10109
-----------------
DNA (384bp)
protein (128aa)
id=5048666 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45329.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_12_scaffold_4436_17

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10253..11668
-----------------
DNA (1416bp)
protein (472aa)
glutamyl-tRNA(Gln) amidotransferase subunit B; K02434 aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B [EC:6.3.5.6 6.3.5.7] id=5044939 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 rbh
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_0012
aspartyl-tRNA(Asn)/glutamyl-tRNA (Gln) amidotransferase subunit B (EC:6.3.5.6)
rifcsplowo2_12_scaffold_4436_18
Muricauda ruestringensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11672..12172)
-----------------
DNA (501bp)
protein (167aa)
Uncharacterized protein n=1 Tax=Muricauda ruestringensis (strain DSM 13258 / LMG 19739 / B1) RepID=G2PK71_MURRD
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEM69845.1}; TaxID=886377 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Muricauda.;" source="Muricauda ruestringensis
rifcsplowo2_12_scaffold_4436_19
AR11, Woesearchaeaota, DPANN, Archaea

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comp(12175..13392)
-----------------
DNA (1218bp)
protein (406aa)
Rad32-like protein; K06915 Tax=AR11
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Metallophosphoesterase
rifcsplowo2_12_scaffold_4436_20
unknown

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comp(13404..13898)
-----------------
DNA (495bp)
protein (165aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4436_21

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comp(13861..15417)
-----------------
DNA (1557bp)
protein (519aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO51296.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
ATPase; K06915 id=5042252 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
ATPase
rifcsplowo2_12_scaffold_4436_22

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comp(15660..16220)
-----------------
DNA (561bp)
protein (187aa)
hypothetical protein
seg id=5042266 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46764.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_12_scaffold_4436_23

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comp(16332..16886)
-----------------
DNA (555bp)
protein (185aa)
hypothetical protein
seg id=5042267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46765.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_12_scaffold_4436_24
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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16962..17528
-----------------
DNA (567bp)
protein (189aa)
small GTP-binding protein; K06883 Tax=RBG_13_Woesearchaeota_36_6_curated
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
Displaying 24 items

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