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rifcsplowo2_12_scaffold_4608

Search features with annotation key words

Displaying items 1-30 of 31 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_4608_1
unknown

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31..552
-----------------
DNA (522bp)
protein (174aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4608_2

Not on your lists

555..1751
-----------------
DNA (1197bp)
protein (399aa)
Dihydroorotase, multifunctional complex type n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AMD4_SEBTE
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dihydroorotase
rifcsplowo2_12_scaffold_4608_3
Parcubacteria bacterium GW2011_GWC2_49_9, Parcubacteria, Bacteria

Not on your lists

1744..2370
-----------------
DNA (627bp)
protein (209aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000313|EMBL:KKW16468.1}; TaxID=1618934 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC2_49_9.;"
Orotate phosphoribosyltransferase id=5799619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_12_scaffold_4608_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2480..3184
-----------------
DNA (705bp)
protein (235aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5046258 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase Tax=AR11
rifcsplowo2_12_scaffold_4608_5
AR15, Woesearchaeaota, DPANN, Archaea

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3234..3554
-----------------
DNA (321bp)
protein (107aa)
transmembrane_regions id=5799577 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
transmembrane_regions Tax=AR15
rifcsplowo2_12_scaffold_4608_6
RHI_Planctomycetes_52_36, Planctomycetes, Bacteria

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3574..4167
-----------------
DNA (594bp)
protein (198aa)
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Planctomycetes_52_36_curated
hypothetical protein id=14425722 bin=bin1_lowGC species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=bin1_lowGC organism_group=Unknown_CP
metal dependent hydrolase
rifcsplowo2_12_scaffold_4608_7

Not on your lists

4217..4741
-----------------
DNA (525bp)
protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ57798.1}; TaxID=1618780 species="Bacteria; Parcubacteria.;" source="Parcubacteria (OD1-vii) bacterium GW2011_GWA2_38_13b.;"
Protein containing YHS domain protein id=5799612 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_12_scaffold_4608_trna_1
unknown

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4779..4851
-----------------
DNA (73bp)
transferRNA
rifcsplowo2_12_scaffold_4608_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4854..6047
-----------------
DNA (1194bp)
protein (398aa)
Methylase Tax=AR11
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_12_scaffold_4608_9
unknown

Not on your lists

6050..6496
-----------------
DNA (447bp)
protein (149aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4608_10
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

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6616..7914
-----------------
DNA (1299bp)
protein (433aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] Tax=RBG_13_Pacearchaeota_33_26_curated
Methylated-DNA--protein-cysteine methyltransferase n=1 Tax=Methanococcus maripaludis (strain C7 / ATCC BAA-1331) RepID=A6VI58_METM7 id=5103637 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
cysteine methyltransferase
rifcsplowo2_12_scaffold_4608_11
unknown

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comp(7873..8286)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4608_12
unknown

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comp(8298..8729)
-----------------
DNA (432bp)
protein (144aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4608_13

Not on your lists

comp(8802..10079)
-----------------
DNA (1278bp)
protein (426aa)
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Transcription initiation factor IIB {ECO:0000256|HAMAP-Rule:MF_00383}; Short=TFIIB {ECO:0000256|HAMAP-Rule:MF_00383};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Transcription initiation factor IIB
rifcsplowo2_12_scaffold_4608_14
R_RIF_OD1_06_39_25, RIF-OD1-6, Parcubacteria, Bacteria

Not on your lists

comp(10393..12015)
-----------------
DNA (1623bp)
protein (541aa)
seg id=5800583 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_06_39_25_curated
rifcsplowo2_12_scaffold_4608_15
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(12021..13505)
-----------------
DNA (1485bp)
protein (495aa)
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] Tax=CG_Woesearch_02
AMP phosphohydrolase; K00758 thymidine phosphorylase [EC:2.4.2.4] id=5043588 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b rbh
AMP phosphohydrolase
rifcsplowo2_12_scaffold_4608_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13627..14763)
-----------------
DNA (1137bp)
protein (379aa)
hypothetical protein id=5044164 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
hypothetical protein
rifcsplowo2_12_scaffold_4608_trna_4
unknown

Not on your lists

comp(14793..14887)
-----------------
DNA (95bp)
transferRNA
rifcsplowo2_12_scaffold_4608_trna_3
unknown

Not on your lists

comp(15163..15283)
-----------------
DNA (121bp)
transferRNA
rifcsplowo2_12_scaffold_4608_17
unknown

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comp(15352..15765)
-----------------
DNA (414bp)
protein (138aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4608_trna_2
unknown

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comp(15795..15928)
-----------------
DNA (134bp)
transferRNA
rifcsplowo2_12_scaffold_4608_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(15976..16485)
-----------------
DNA (510bp)
protein (170aa)
id=5041691 Tax=CG_Woesearch_02
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_4608_19

Not on your lists

comp(16491..17027)
-----------------
DNA (537bp)
protein (179aa)
Marine sediment metagenome DNA, contig: S01H1_S08790 {ECO:0000313|EMBL:GAG12683.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5041691 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_4608_20
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

comp(17027..17587)
-----------------
DNA (561bp)
protein (187aa)
id=5041692 Tax=CG_Woesearch_03
rifcsplowo2_12_scaffold_4608_21
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(17880..18431)
-----------------
DNA (552bp)
protein (184aa)
Putative signal transduction protein with CBS domains n=1 Tax=Methanothermus fervidus (strain ATCC 43054 / DSM 2088 / JCM 10308 / V24 S) RepID=E3GXK7_METFV
putative signal transduction protein with CBS domains Tax=CG_Woesearch_02
signal transduction protein with cbs domains
rifcsplowo2_12_scaffold_4608_22
unknown

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comp(18684..19850)
-----------------
DNA (1167bp)
protein (389aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4608_23

Not on your lists

20079..20663
-----------------
DNA (585bp)
protein (195aa)
hypothetical protein
id=5103355 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62636.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_12_scaffold_4608_24

Not on your lists

20660..21169
-----------------
DNA (510bp)
protein (170aa)
hypothetical protein
id=5103354 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62635.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsplowo2_12_scaffold_4608_25
unknown

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comp(21233..21820)
-----------------
DNA (588bp)
protein (196aa)

This feature has no annotations

rifcsplowo2_12_scaffold_4608_26
unknown

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comp(21830..22420)
-----------------
DNA (591bp)
protein (197aa)

This feature has no annotations

Displaying items 1-30 of 31 in total

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