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rifcsplowo2_12_scaffold_5213

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_5213_1

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comp(1..1224)
-----------------
DNA (1224bp)
protein (408aa)
Histidine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00127}; EC=6.1.1.21 {ECO:0000256|HAMAP-Rule:MF_00127};; Histidyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00127}; TaxID=1579378 species="Archaea.;"
Histidine--tRNA ligase n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SVR1_9BACT id=5103662 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Histidine-tRNA ligase
rifcsplowo2_12_scaffold_5213_2
GWA1_Kazan_50_15, GWA1_Kazan_50_15, GWA1_Kazan_50_15, GWA1_Kazan_50_15, KAZAN, Bacteria

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comp(1304..1963)
-----------------
DNA (660bp)
protein (220aa)
ATP phosphoribosyltransferase id=3327401 bin=GWA1_Kazan_50_15 species=unknown genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
ATP phosphoribosyltransferase id=3327401 bin=GWA1_Kazan_50_15 species=unknown genus=Propionibacterium taxon_order=Actinomycetales taxon_class=Actinobacteria phylum=Actinobacteria tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
rifcsplowo2_12_scaffold_5213_3
RBG_16_Anaeromyxobacter_69_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1996..2376)
-----------------
DNA (381bp)
protein (127aa)
phosphoribosyl-AMP cyclohydrolase; K01496 phosphoribosyl-AMP cyclohydrolase [EC:3.5.4.19] Tax=RBG_16_Anaeromyxobacter_69_14_curated
Phosphoribosyl-AMP cyclohydrolase n=1 Tax=Coraliomargarita akajimensis (strain DSM 45221 / IAM 15411 / JCM 23193 / KCTC 12865) RepID=D5ERB5_CORAD
phosphoribosyl-AMP cyclohydrolase
rifcsplowo2_12_scaffold_5213_4
unknown

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comp(2677..3765)
-----------------
DNA (1089bp)
protein (363aa)

This feature has no annotations

rifcsplowo2_12_scaffold_5213_5
R_Planctomycetes_50_16, Planctomycetes, Bacteria

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3968..4840
-----------------
DNA (873bp)
protein (291aa)
asparaginase; K01424 L-asparaginase [EC:3.5.1.1] Tax=RIFCSPLOWO2_02_FULL_Planctomycetes_50_16_curated
Asparaginase n=1 Tax=Flavobacteriaceae bacterium (strain 3519-10) RepID=C6X5X7_FLAB3
asparaginase
rifcsplowo2_12_scaffold_5213_6

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comp(4969..5634)
-----------------
DNA (666bp)
protein (222aa)
Marine sediment metagenome DNA, contig: S01H1_C01094 {ECO:0000313|EMBL:GAF85506.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_12_scaffold_5213_7
GWA2_OP11_37_7, Roizmanbacteria, Microgenomates, Bacteria

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comp(5636..6346)
-----------------
DNA (711bp)
protein (237aa)
phosphoglycolate phosphatase (EC:3.1.3.18)
Putative phosphorylated carbohydrates phosphatase id=3327403 bin=GWA1_Kazan_50_15 species=uncultured archaeon genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA1_Kazan_50_15 organism_group=Kazan organism_desc=Probably Kazan: candidate for curation
Uncharacterized protein {ECO:0000313|EMBL:KKQ36132.1}; TaxID=1618481 species="Bacteria; Microgenomates.;" source="Microgenomates (Roizmanbacteria) bacterium GW2011_GWA2_37_7.;"
rifcsplowo2_12_scaffold_5213_8
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(6343..6990)
-----------------
DNA (648bp)
protein (216aa)
O-sialoglycoprotein endopeptidase; K07174 Mn2+-dependent serine/threonine protein kinase [EC:2.7.1.-] Tax=CG_Woesearch_02
Serine/threonine protein kinase, RIO1 family (EC:2.7.1.-)
O-sialoglycoprotein endopeptidase id=5800366 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_12_scaffold_5213_9
unknown

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7031..7336
-----------------
DNA (306bp)
protein (102aa)

This feature has no annotations

rifcsplowo2_12_scaffold_5213_10
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7502..8254)
-----------------
DNA (753bp)
protein (251aa)
30S ribosomal protein S3Ae Tax=CG_Woesearch_02
Ribosomal protein S3AE id=5799806 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
SSU ribosomal protein S3AE
rifcsplowo2_12_scaffold_5213_11

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comp(8529..10427)
-----------------
DNA (1899bp)
protein (633aa)
DNA gyrase subunit B {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363}; EC=5.99.1.3 {ECO:0000256|HAMAP-Rule:MF_01898, ECO:0000256|RuleBase:RU003363};; TaxID=1579371 species="Archaea.;"
DNA topoisomerase IV subunit B (EC:5.99.1.3)
DNA gyrase subunit B n=3 Tax=Thermoanaerobacter RepID=B0KAG9_THEP3
rifcsplowo2_12_scaffold_5213_12

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10738..11049
-----------------
DNA (312bp)
protein (104aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX62_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KKN31900.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsplowo2_12_scaffold_5213_13
Archaeoglobus sulfaticallidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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11046..11528
-----------------
DNA (483bp)
protein (161aa)
Putative nucleic acid-binding protein, contains PIN domain n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BF12_9EURY
putative nucleic acid-binding protein, contains PIN domain
Putative nucleic acid-binding protein, contains PIN domain {ECO:0000313|EMBL:AGK62249.1}; TaxID=387631 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;
rifcsplowo2_12_scaffold_5213_14
AR4, Woesearchaeaota, DPANN, Archaea

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11728..12681
-----------------
DNA (954bp)
protein (318aa)
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein id=5041685 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
daunorubicin resistance ABC transporter ATPase subunit; K09687 antibiotic transport system ATP-binding protein Tax=AR4
daunorubicin resistance ATP-binding drrA-like protein
rifcsplowo2_12_scaffold_5213_15
AR4, Woesearchaeaota, DPANN, Archaea

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12678..13463
-----------------
DNA (786bp)
protein (262aa)
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein id=5041686 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
putative ABC transporter ATP-binding and permease; K01992 ABC-2 type transport system permease protein Tax=AR4
putative ABC transporter ATP-binding and permease
rifcsplowo2_12_scaffold_5213_16

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13555..13758
-----------------
DNA (204bp)
protein (68aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JAQ2_9ARCH
Putative uncharacterized protein {ECO:0000313|EMBL:CBH39182.1}; TaxID=115547 species="Archaea; environmental samples.;" source="uncultured archaeon.;"
rifcsplowo2_12_scaffold_5213_17
RifOxyB12_full_Planctomycetes_42_10_curated, Planctomycetes, Bacteria

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13764..14018
-----------------
DNA (255bp)
protein (85aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Methanobacterium sp. Maddingley MBC34 RepID=K6TTY0_9EURY
RelE/StbE family addiction module toxin Tax=RifOxyB12_full_Planctomycetes_42_10_curated
rifcsplowo2_12_scaffold_5213_18
unknown

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comp(14058..14165)
-----------------
DNA (108bp)
protein (36aa)

This feature has no annotations

rifcsplowo2_12_scaffold_5213_19
GWC2_Verrucomicrobia_42_7_curated, Opitutae, Verrucomicrobia, Bacteria

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comp(14325..14480)
-----------------
DNA (156bp)
protein (52aa)
Tax=GWC2_Verrucomicrobia_42_7_curated
rifcsplowo2_12_scaffold_5213_20
GWC2_Verrucomicrobia_42_7_curated, Opitutae, Verrucomicrobia, Bacteria

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14724..15662
-----------------
DNA (939bp)
protein (313aa)
SpoVT/AbrB domain protein n=12 Tax=Sulfolobus RepID=C3MR72_SULIL id=5103746 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
phosphate uptake regulator PhoU Tax=GWC2_Verrucomicrobia_42_7_curated
SpoVT/AbrB protein
rifcsplowo2_12_scaffold_5213_21
CG_CPR16-01, CG_CPR16, Bacteria

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comp(15659..16753)
-----------------
DNA (1095bp)
protein (365aa)
purM; phosphoribosylaminoimidazole synthetase (EC:6.3.3.1); K01933 phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1] Tax=CG_CPR16-01
Phosphoribosylformylglycinamidine cyclo-ligase n=1 Tax=Methanosaeta harundinacea (strain 6Ac) RepID=G7WLU3_METH6
Phosphoribosylformylglycinamidine cyclo-ligase
rifcsplowo2_12_scaffold_5213_22
unknown

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comp(16777..17253)
-----------------
DNA (477bp)
protein (159aa)

This feature has no annotations

rifcsplowo2_12_scaffold_5213_23
AR15, Woesearchaeaota, DPANN, Archaea

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comp(17315..19468)
-----------------
DNA (2154bp)
protein (718aa)
Putative copper amine oxidase-like protein id=5800765 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Putative copper amine oxidase-like protein Tax=AR15
copper amine oxidase-like protein
Displaying 23 items

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