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rifcsplowo2_12_scaffold_6054

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_12_scaffold_6054_1
AR11, Woesearchaeaota, DPANN, Archaea

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1..186
-----------------
DNA (186bp)
protein (62aa)
carbohydrate kinase
Sugar kinase, YjeF-related protein family Tax=AR11
carbohydrate kinase id=5240577 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_12_scaffold_6054_2
unknown

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comp(183..1700)
-----------------
DNA (1518bp)
protein (506aa)

This feature has no annotations

rifcsplowo2_12_scaffold_6054_3
unknown

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comp(1688..2062)
-----------------
DNA (375bp)
protein (125aa)

This feature has no annotations

rifcsplowo2_12_scaffold_6054_4
unknown

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comp(2091..3104)
-----------------
DNA (1014bp)
protein (338aa)

This feature has no annotations

rifcsplowo2_12_scaffold_6054_5

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3295..3441
-----------------
DNA (147bp)
protein (49aa)
Marine sediment metagenome DNA, contig: S01H1_S04483 {ECO:0000313|EMBL:GAF88852.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
id=5048099 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_6054_6

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3458..3607
-----------------
DNA (150bp)
protein (50aa)
Marine sediment metagenome DNA, contig: S12H4_S13538 {ECO:0000313|EMBL:GAJ07328.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_12_scaffold_6054_7
CG_Woesearch_02, Woesearchaeota, Archaea

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3609..5321
-----------------
DNA (1713bp)
protein (571aa)
sodium/hydrogen exchanger Tax=CG_Woesearch_02
sodium/hydrogen exchanger id=5043948 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 rbh
Transporter, CPA2 family
rifcsplowo2_12_scaffold_6054_8
CG_Woesearch_02, Woesearchaeota, Archaea

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5324..5581
-----------------
DNA (258bp)
protein (86aa)
Putative uncharacterized protein n=1 Tax=Methanococcus maripaludis (strain S2 / LL) RepID=Q6M0W3_METMP
hypothetical protein; K07574 RNA-binding protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_12_scaffold_6054_9
CG_Woesearch_03, Woesearchaeota, Archaea

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5685..7097
-----------------
DNA (1413bp)
protein (471aa)
hypothetical protein
Putative uncharacterized protein Tax=CG_Woesearch_03
Putative uncharacterized protein id=5043950 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_6054_10
CG_Woesearch_03, Woesearchaeota, Archaea

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7230..9428
-----------------
DNA (2199bp)
protein (733aa)
AP endonuclease family enzyme
Xylose isomerase-like, TIM barrel domain Tax=CG_Woesearch_03
Xylose isomerase-like, TIM barrel domain id=5043952 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_12_scaffold_6054_11

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9512..10006
-----------------
DNA (495bp)
protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52067.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_12_scaffold_6054_12
unknown

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comp(10129..10764)
-----------------
DNA (636bp)
protein (212aa)

This feature has no annotations

rifcsplowo2_12_scaffold_6054_13
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(10863..11444)
-----------------
DNA (582bp)
protein (194aa)
Uncharacterized protein n=1 Tax=Pyrococcus furiosus COM1 RepID=I6UZ03_9EURY
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsplowo2_12_scaffold_6054_14

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11518..12069
-----------------
DNA (552bp)
protein (184aa)
Putative uncharacterized protein n=1 Tax=Syntrophobacter fumaroxidans (strain DSM 10017 / MPOB) RepID=A0LHT2_SYNFM
Uncharacterized protein {ECO:0000313|EMBL:KHO52072.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
rifcsplowo2_12_scaffold_6054_15
AR11, Woesearchaeaota, DPANN, Archaea

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comp(12050..12892)
-----------------
DNA (843bp)
protein (281aa)
hypothetical protein Tax=AR11
rifcsplowo2_12_scaffold_6054_16

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13002..13802
-----------------
DNA (801bp)
protein (267aa)
DNA polymerase beta protein {ECO:0000313|EMBL:KHO52074.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA polymerase beta domain protein region (Fragment) id=4315674 bin=GWC2_Elusimicrobia_51_8 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWC2_Elusimicrobia_51_8 organism_group=Elusimicrobia
DNA polymerase beta protein
rifcsplowo2_12_scaffold_6054_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13837..14406
-----------------
DNA (570bp)
protein (190aa)
hypothetical protein Tax=CG_Woesearch_02
UPI00021A58A9 related cluster id=5800731 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_12_scaffold_6054_18
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14414..16852)
-----------------
DNA (2439bp)
protein (813aa)
Outer membrane adhesin like proteiin Tax=AR11
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
RHS repeat-associated core protein
Displaying 18 items

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